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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1079580 |
| Transcript ID | Lj2g3v1079580.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nipped-B-like protein-like [Cicer arietinum] gi|502091147|ref|XP_004489457.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 899 | 898 | 0 | ||
| Gene3D | 70 | 234 | 165 | 1.50E-08 | ||
| SUPERFAMILY | 85 | 241 | 157 | 2.18E-29 | ||
| Pfam | 114 | 155 | 42 | 2.00E-12 | ||
| Gene3D | 367 | 560 | 194 | 1.60E-04 | ||
| SUPERFAMILY | 372 | 541 | 170 | 2.18E-29 | ||
| SUPERFAMILY | 613 | 813 | 201 | 2.18E-29 | ||
| Pfam | 614 | 811 | 198 | 1.50E-54 | ||
| Gene3D | 634 | 685 | 52 | 1.60E-04 | ||
| PANTHER | 927 | 1074 | 148 | 0 | ||
| MobiDBLite | 1029 | 1055 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chromatin binding | Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. | ||
| Biological process | Regulation of gene expression | Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form. |
Expression pattern of Lj2g3v1079580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1079580.1, powered by CORGI.
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