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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1141840 |
| Transcript ID | Lj2g3v1141840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable nitrite transporter At1g68570-like [Cicer arietinum] gi|502168944|ref|XP_004514500.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | – | – | |
| Pfam | 5 | 238 | 234 | 1.30E-49 | ||
| PANTHER | 6 | 301 | 296 | 3.40E-213 | ||
| PANTHER | 6 | 301 | 296 | 3.40E-213 | – | |
| Phobius | 40 | 59 | 20 | – | – | |
| SUPERFAMILY | 53 | 272 | 220 | 3.14E-10 | ||
| Phobius | 60 | 78 | 19 | – | – | |
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 79 | 101 | 23 | – | – | |
| Phobius | 102 | 120 | 19 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 121 | 142 | 22 | – | – | |
| Phobius | 143 | 161 | 19 | – | – | |
| Phobius | 162 | 186 | 25 | – | – | |
| Phobius | 187 | 206 | 20 | – | – | |
| TMHMM | 205 | 227 | 23 | – | – | |
| Phobius | 207 | 231 | 25 | – | – | |
| Phobius | 232 | 250 | 19 | – | – | |
| TMHMM | 251 | 270 | 20 | – | – | |
| Phobius | 251 | 269 | 19 | – | – | |
| Phobius | 270 | 302 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1141840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1141840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.