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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1252790 |
| Transcript ID | Lj2g3v1252790.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like isoform X1 [Cicer arietinum] gi|502094215|ref|XP_004490167.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 36 | 36 | – | – | |
| PANTHER | 17 | 304 | 288 | 2.40E-192 | – | |
| PANTHER | 17 | 304 | 288 | 2.40E-192 | – | |
| MobiDBLite | 33 | 81 | 49 | – | – | |
| Gene3D | 106 | 151 | 46 | 1.00E-04 | ||
| ProSiteProfiles | 137 | 172 | 36 | 6.292 | ||
| ProSiteProfiles | 173 | 207 | 35 | 8.846 | ||
| Pfam | 176 | 204 | 29 | 0.11 | ||
| Gene3D | 188 | 205 | 18 | 1.00E-04 | ||
| ProSiteProfiles | 210 | 244 | 35 | 6.171 | ||
| PANTHER | 367 | 397 | 31 | 2.40E-192 | – | |
| PANTHER | 367 | 397 | 31 | 2.40E-192 | – | |
| Gene3D | 367 | 544 | 178 | 1.00E-04 | ||
| PANTHER | 445 | 608 | 164 | 2.40E-192 | – | |
| PANTHER | 445 | 608 | 164 | 2.40E-192 | – | |
| ProSiteProfiles | 450 | 485 | 36 | 6.675 | ||
| Pfam | 485 | 531 | 47 | 6.30E-10 | ||
| ProSiteProfiles | 486 | 520 | 35 | 11.137 | ||
| TIGRFAM | 488 | 522 | 35 | 5.40E-06 | ||
| ProSiteProfiles | 521 | 555 | 35 | 9.799 | ||
| TIGRFAM | 524 | 556 | 33 | 1.40E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1252790.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1252790.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.