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Lj2g3v1277510.1

Overview

Field Value
Gene ID Lj2g3v1277510
Transcript ID Lj2g3v1277510.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dual specificity protein kinase pyk1-like [Glycine max] gi|356497930|ref|XP_003517809.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 187 187 8.70E-106
Pfam 1 187 187 7.40E-43
ProSiteProfiles 1 187 187 35.029
Gene3D 1 185 185 1.20E-49
PANTHER 1 187 187 8.70E-106
SUPERFAMILY 1 187 187 4.23E-55
SMART 2 185 184 4.10E-13
PRINTS 4 17 14 9.50E-09
PRINTS 42 60 19 9.50E-09
ProSitePatterns 48 60 13
PRINTS 158 180 23 9.50E-09

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj2g3v1277510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1277510.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.