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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1353620 |
| Transcript ID | Lj2g3v1353620.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phospholipid-transporting ATPase 3-like [Glycine max] gi|356570066|ref|XP_003553212.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 223 | 223 | – | – | |
| PANTHER | 2 | 468 | 467 | 0 | – | |
| PANTHER | 2 | 468 | 467 | 0 | ||
| TIGRFAM | 2 | 451 | 450 | 3.00E-177 | ||
| SUPERFAMILY | 3 | 56 | 54 | 1.50E-29 | ||
| Gene3D | 6 | 66 | 61 | 1.10E-42 | ||
| SUPERFAMILY | 108 | 213 | 106 | 1.50E-29 | ||
| Gene3D | 136 | 221 | 86 | 1.10E-42 | ||
| TIGRFAM | 138 | 244 | 107 | 1.30E-32 | ||
| Pfam | 193 | 443 | 251 | 4.50E-81 | ||
| SUPERFAMILY | 214 | 443 | 230 | 5.49E-21 | – | |
| TMHMM | 224 | 243 | 20 | – | – | |
| Phobius | 224 | 242 | 19 | – | – | |
| Phobius | 243 | 261 | 19 | – | – | |
| TMHMM | 258 | 277 | 20 | – | – | |
| Phobius | 262 | 281 | 20 | – | – | |
| Phobius | 282 | 301 | 20 | – | – | |
| Phobius | 302 | 325 | 24 | – | – | |
| TMHMM | 306 | 325 | 20 | – | – | |
| Phobius | 326 | 339 | 14 | – | – | |
| TMHMM | 340 | 362 | 23 | – | – | |
| Phobius | 340 | 359 | 20 | – | – | |
| Phobius | 360 | 370 | 11 | – | – | |
| TMHMM | 371 | 393 | 23 | – | – | |
| Phobius | 371 | 393 | 23 | – | – | |
| Phobius | 394 | 404 | 11 | – | – | |
| Phobius | 405 | 429 | 25 | – | – | |
| TMHMM | 408 | 430 | 23 | – | – | |
| Phobius | 430 | 468 | 39 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj2g3v1353620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1353620.1, powered by CORGI.
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