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Lj2g3v1364780.1

Overview

Field Value
Gene ID Lj2g3v1364780
Transcript ID Lj2g3v1364780.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Cicer arietinum] gi|502093455|ref|XP_004489948.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.60.21.10
4 301 298 9.00E-139
IPR029052
SUPERFAMILY
SSF56300
6 293 288 6.84E-116
IPR029052
PANTHER
PTHR11668:SF257
6 306 301 3.60E-281 –
PANTHER
PTHR11668
6 306 301 3.60E-281 –
CDD
cd07415
6 290 285 0 –
SMART
SM00156
20 290 271 4.00E-150
IPR006186
Pfam
PF00149
48 239 192 4.50E-34
IPR004843
PRINTS
PR00114
48 75 28 2.20E-91
IPR006186
PRINTS
PR00114
77 104 28 2.20E-91
IPR006186
PRINTS
PR00114
110 134 25 2.20E-91
IPR006186
ProSitePatterns
PS00125
111 116 6 –
IPR006186
PRINTS
PR00114
145 171 27 2.20E-91
IPR006186
PRINTS
PR00114
174 201 28 2.20E-91
IPR006186
PRINTS
PR00114
230 250 21 2.20E-91
IPR006186
PRINTS
PR00114
252 268 17 2.20E-91
IPR006186

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj2g3v1364780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1364780.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.