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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1468360 |
| Transcript ID | Lj2g3v1468360.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Spinster-like protein [Medicago truncatula] gi|357485271|ref|XP_003612923.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 74 | 74 | – | – | |
| PANTHER | 7 | 220 | 214 | 6.00E-303 | – | |
| PANTHER | 7 | 220 | 214 | 6.00E-303 | – | |
| SUPERFAMILY | 8 | 233 | 226 | 1.44E-47 | ||
| Gene3D | 18 | 212 | 195 | 1.30E-19 | – | |
| ProSiteProfiles | 19 | 470 | 452 | 17.056 | ||
| Pfam | 47 | 413 | 367 | 1.20E-27 | ||
| CDD | 65 | 461 | 397 | 3.44E-18 | ||
| TMHMM | 74 | 93 | 20 | – | – | |
| Phobius | 75 | 94 | 20 | – | – | |
| Phobius | 95 | 105 | 11 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 106 | 127 | 22 | – | – | |
| Phobius | 128 | 132 | 5 | – | – | |
| Phobius | 133 | 149 | 17 | – | – | |
| Phobius | 150 | 160 | 11 | – | – | |
| Phobius | 161 | 179 | 19 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 180 | 190 | 11 | – | – | |
| TMHMM | 187 | 209 | 23 | – | – | |
| Phobius | 191 | 210 | 20 | – | – | |
| Phobius | 211 | 277 | 67 | – | – | |
| PANTHER | 244 | 480 | 237 | 6.00E-303 | – | |
| PANTHER | 244 | 480 | 237 | 6.00E-303 | – | |
| SUPERFAMILY | 260 | 470 | 211 | 1.44E-47 | ||
| Gene3D | 274 | 461 | 188 | 3.50E-10 | – | |
| TMHMM | 278 | 300 | 23 | – | – | |
| Phobius | 278 | 299 | 22 | – | – | |
| Phobius | 300 | 314 | 15 | – | – | |
| Phobius | 315 | 335 | 21 | – | – | |
| TMHMM | 315 | 336 | 22 | – | – | |
| Phobius | 336 | 346 | 11 | – | – | |
| Phobius | 347 | 367 | 21 | – | – | |
| TMHMM | 349 | 367 | 19 | – | – | |
| Phobius | 368 | 372 | 5 | – | – | |
| TMHMM | 372 | 394 | 23 | – | – | |
| Phobius | 373 | 394 | 22 | – | – | |
| Phobius | 395 | 440 | 46 | – | – | |
| Phobius | 441 | 461 | 21 | – | – | |
| TMHMM | 442 | 464 | 23 | – | – | |
| Phobius | 462 | 497 | 36 | – | – | |
| MobiDBLite | 474 | 497 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1468360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1468360.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.