Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj2g3v1535110.1

Overview

Field Value
Gene ID Lj2g3v1535110
Transcript ID Lj2g3v1535110.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: disease resistance protein RPM1-like [Cicer arietinum] gi|502162289|ref|XP_004512454.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD
cd14798
2 126 125 8.27E-37 –
PANTHER
PTHR23155
3 774 772 0 –
PANTHER
PTHR23155:SF633
3 774 772 0 –
SUPERFAMILY
SSF52540
159 429 271 3.95E-65
IPR027417
Pfam
PF00931
169 457 289 2.30E-76
IPR002182
Gene3D
G3DSA:3.40.50.300
173 343 171 2.20E-19
IPR027417
PRINTS
PR00364
187 202 16 5.00E-19 –
PRINTS
PR00364
267 281 15 5.00E-19 –
PRINTS
PR00364
362 376 15 5.00E-19 –
SUPERFAMILY
SSF52058
493 886 394 2.04E-40
IPR032675
Gene3D
G3DSA:3.80.10.10
575 638 64 7.60E-26
IPR032675
PRINTS
PR00364
619 635 17 5.00E-19 –
Gene3D
G3DSA:3.80.10.10
698 884 187 7.60E-26
IPR032675
PANTHER
PTHR23155:SF633
823 872 50 0 –
PANTHER
PTHR23155
823 872 50 0 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj2g3v1535110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1535110.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.