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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1537380 |
| Transcript ID | Lj2g3v1537380.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: growth-regulating factor 5-like isoform X1 [Cicer arietinum] gi|502162164|ref|XP_004512413.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 26 | 339 | 314 | 1.40E-148 | ||
| PANTHER | 26 | 339 | 314 | 1.40E-148 | – | |
| SMART | 31 | 67 | 37 | 2.20E-10 | ||
| Pfam | 32 | 66 | 35 | 3.70E-14 | ||
| ProSiteProfiles | 32 | 67 | 36 | 22.637 | ||
| MobiDBLite | 82 | 109 | 28 | – | – | |
| ProSiteProfiles | 87 | 131 | 45 | 22.663 | ||
| Pfam | 88 | 130 | 43 | 3.60E-18 | ||
| MobiDBLite | 124 | 152 | 29 | – | – | |
| ProSitePatterns | 280 | 291 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Developmental process | A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v1537380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1537380.1, powered by CORGI.
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