Domain Predictions — View

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PF08879

Source: Pfam

Description

WRC

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 34

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0198589.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor 5 isoform 3 [Theobroma cacao] gi\|508783032\|gb\|EOY30288.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF4 SM00951 mobidb-lite	11
Lj0g3v0266619.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: lysine-specific demethylase 3B-like [Glycine max] gi\|356573855\|ref\|XP_003555071.1\|	Domains Coil IPR001841 IPR003347 IPR014977 PF02373 PF08879 PS50089 PS51184 PS51667 PTHR12549 PTHR12549:SF16 SM00558 SSF51197 mobidb-lite	14
Lj0g3v0275479.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains IPR014977 PF08879 PS51667 PTHR34122 mobidb-lite	5
Lj0g3v0275489.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_024932 [Theobroma cacao] gi\|508717619\|gb\|EOY09516.1\|	Domains IPR014977 IPR031137 NON_CYTOPLASMIC_DOMAIN PF08879 PS51667 PTHR31602 PTHR31602:SF19 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	12
Lj1g3v1049410.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor [Medicago truncatula] gi\|357464113\|ref\|XP_003602338.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF11 SM00951 mobidb-lite	11
Lj1g3v4328790.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_024932 [Theobroma cacao] gi\|508717619\|gb\|EOY09516.1\|	Domains IPR014977 IPR031137 NON_CYTOPLASMIC_DOMAIN PF08879 PS51667 PTHR31602 PTHR31602:SF19 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	12
Lj1g3v4699740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: growth-regulating factor 3-like [Cicer arietinum] gi\|502111733\|ref\|XP_004494150.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF12 SM00951 mobidb-lite	11
Lj2g3v1537380.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: growth-regulating factor 5-like isoform X1 [Cicer arietinum] gi\|502162164\|ref\|XP_004512413.1\|	Domains IPR014977 IPR014978 IPR016160 IPR031137 PF08879 PF08880 PS00070 PS51666 PS51667 PTHR31602 PTHR31602:SF20 SM00951 mobidb-lite	13
Lj3g3v2591390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: growth-regulating factor 5-like isoform X2 [Cicer arietinum] gi\|502156422\|ref\|XP_004510466.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF5 SM00951 mobidb-lite	11
Lj3g3v2723650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: growth-regulating factor 9-like isoform X1 [Cicer arietinum] gi\|502157860\|ref\|XP_004510935.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PS51666 PS51667 PTHR31602 PTHR31602:SF3 mobidb-lite	9
Lj3g3v3639790.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: growth-regulating factor 4-like isoform X2 [Cicer arietinum] gi\|502146660\|ref\|XP_004506550.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF8 SM00951 mobidb-lite	11
Lj4g3v2180390.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor 5 isoform 3 [Theobroma cacao] gi\|508783032\|gb\|EOY30288.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF4 SM00951 mobidb-lite	11
Lj5g3v0324520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: growth-regulating factor 6-like [Cicer arietinum] gi\|502125511\|ref\|XP_004498953.1\|	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF2 SM00951 mobidb-lite	11
Lj6g3v0918840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc finger, RING-type; Transcription factor jumonji, jmjC; Zinc finger, C2H2-type [Medicago truncatula] gi\|124359679\|gb\|ABN06047.1\|	Domains IPR014977 PF08879 PS51667 PTHR12549 PTHR12549:SF13	5
Lj6g3v1201190.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor 5 isoform 3 [Theobroma cacao] gi\|508783032\|gb\|EOY30288.1\|	Domains IPR014977 IPR031137 PF08879 PS51667 PTHR31602 PTHR31602:SF4 mobidb-lite	7
LotjaGi1g1v0294700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT4G37740.1 growth-regulating factor 2; Swiss-Prot: sp\|Q8L8A8\|GRF2_ARATH Growth-regulating factor 2; TrEMBL-Plants: tr\|A0A0L9UDP8\|A0A0L9UDP8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0294700	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF53 SM00951 mobidb-lite	11
LotjaGi1g1v0679000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT3G52910.1 growth-regulating factor 4; Swiss-Prot: sp\|Q8L8A7\|GRF4_ARATH Growth-regulating factor 4; TrEMBL-Plants: tr\|V7CXL5\|V7CXL5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0679000	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF63 SM00951 mobidb-lite	11
LotjaGi1g1v0726900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT2G42040.1 WRC protein; Swiss-Prot: sp\|Q9FJB8\|GRF7_ARATH Growth-regulating factor 7; TrEMBL-Plants: tr\|A0A1J7G4P0\|A0A1J7G4P0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0726900	Domains IPR014977 IPR031137 NON_CYTOPLASMIC_DOMAIN PF08879 PS51667 PTHR31602 PTHR31602:SF19 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	12
LotjaGi2g1v0342300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT4G37740.1 growth-regulating factor 2; Swiss-Prot: sp\|Q6AWY6\|GRF3_ORYSJ Growth-regulating factor 3; TrEMBL-Plants: tr\|K7K3Y3\|K7K3Y3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0342300	Domains IPR014977 IPR014978 IPR016160 IPR031137 PF08879 PF08880 PS00070 PS51666 PS51667 PTHR31602 PTHR31602:SF43 SM00951 mobidb-lite	13
LotjaGi3g1v0379600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription factor jumonji (JmjC) domain protein; TAIR: AT1G11950.1 Transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp\|Q9SSE9\|JMJ25_ARATH Lysine-specific demethylase JMJ25; TrEMBL-Plants: tr\|A0A151SZ92\|A0A151SZ92_CAJCA Lysine-specific demethylase 3B; Found in the gene: LotjaGi3g1v0379600	Domains Coil G3DSA:2.60.120.650 IPR001841 IPR003347 IPR014977 PF02373 PF08879 PS50089 PS51184 PS51667 PTHR12549 SM00558 SSF51197 mobidb-lite	14
LotjaGi3g1v0415100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor-like protein; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp\|Q8L8A6\|GRF5_ARATH Growth-regulating factor 5; TrEMBL-Plants: tr\|A0A0S3SZU0\|A0A0S3SZU0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0415100	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF60 SM00951 mobidb-lite	11
LotjaGi3g1v0431300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT2G45480.1 growth-regulating factor 9; Swiss-Prot: sp\|Q8S9M3\|GRF9_ARATH Growth-regulating factor 9; TrEMBL-Plants: tr\|A0A0R0KKP4\|A0A0R0KKP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0431300	Domains IPR014977 IPR014978 IPR031137 PF08879 PS51666 PS51667 PTHR31602 PTHR31602:SF57 mobidb-lite	9
LotjaGi3g1v0543400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp\|Q6AWY4\|GRF5_ORYSJ Growth-regulating factor 5; TrEMBL-Plants: tr\|I1LP40\|I1LP40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0543400	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF8 SM00951 mobidb-lite	11
LotjaGi3g1v0543400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT4G37740.1 growth-regulating factor 2; Swiss-Prot: sp\|Q6AWY4\|GRF5_ORYSJ Growth-regulating factor 5; TrEMBL-Plants: tr\|I1LP40\|I1LP40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0543400	Domains IPR014977 IPR031137 PF08879 PS51667 PTHR31602 PTHR31602:SF8 mobidb-lite	7
LotjaGi4g1v0047800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription factor jumonji (JmjC) domain protein; TAIR: AT4G21430.1 protein B160; Swiss-Prot: sp\|Q9SSE9\|JMJ25_ARATH Lysine-specific demethylase JMJ25; TrEMBL-Plants: tr\|I1KQR1\|I1KQR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0047800	Domains Coil IPR001841 IPR003347 IPR014977 PF02373 PF08879 PS50089 PS51184 PS51667 PTHR12549 PTHR12549:SF42 SM00558 SSF51197 mobidb-lite	14
LotjaGi4g1v0326100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor-like protein; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp\|Q6ZIK5\|GRF4_ORYSJ Growth-regulating factor 4; TrEMBL-Plants: tr\|V7CCG7\|V7CCG7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0326100	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF46 SM00951 mobidb-lite	11
LotjaGi5g1v0036300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT2G22840.1 growth-regulating factor 1; Swiss-Prot: sp\|Q6AWY3\|GRF6_ORYSJ Growth-regulating factor 6; TrEMBL-Plants: tr\|A0A072VEY4\|A0A072VEY4_MEDTR Growth-regulating factor; Found in the gene: LotjaGi5g1v0036300	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF51 SM00951 mobidb-lite	11
LotjaGi5g1v0117600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT2G42040.1 WRC protein; Swiss-Prot: sp\|Q9FRG8\|GRF9_ORYSJ Growth-regulating factor 9; TrEMBL-Plants: tr\|A0A151QTU9\|A0A151QTU9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0117600	Domains IPR014977 IPR031137 NON_CYTOPLASMIC_DOMAIN PF08879 PS51667 PTHR31602 PTHR31602:SF19 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	12
LotjaGi5g1v0222200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription factor jumonji domain protein; TAIR: AT1G09060.3 JmjC domain protein JMJ24; Swiss-Prot: sp\|Q9SSE9\|JMJ25_ARATH Lysine-specific demethylase JMJ25; TrEMBL-Plants: tr\|G7I8M9\|G7I8M9_MEDTR Transcription factor jumonji domain protein; Found in the gene: LotjaGi5g1v0222200	Domains Coil IPR001841 IPR003347 IPR014977 IPR018866 PF02373 PF08879 PF10497 PS50089 PS51184 PS51667 PTHR12549 PTHR12549:SF17 SM00558 SSF51197 mobidb-lite	16
LotjaGi6g1v0164500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT4G21430.1 protein B160; Swiss-Prot: sp\|Q6AWY3\|GRF6_ORYSJ Growth-regulating factor 6; TrEMBL-Plants: tr\|V7BT86\|V7BT86_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0164500_LC	Domains IPR014977 PF08879 PS51667 PTHR12549 PTHR12549:SF42	5
LotjaGi6g1v0164600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT4G24150.1 growth-regulating factor 8; Swiss-Prot: sp\|Q9SU44\|GRF8_ARATH Growth-regulating factor 8; TrEMBL-Plants: tr\|A0A1J7HCG3\|A0A1J7HCG3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0164600_LC	Domains IPR014977 PF08879 PS51667 PTHR12549 PTHR12549:SF43 mobidb-lite	6
LotjaGi6g1v0164800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor; TAIR: AT4G21430.1 protein B160; Swiss-Prot: sp\|Q6AWX8\|GRF11_ORYSJ Growth-regulating factor 11; TrEMBL-Plants: tr\|A0A0L9VG03\|A0A0L9VG03_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0164800_LC	Domains IPR014977 PF08879 PS51667 PTHR12549 PTHR12549:SF42 mobidb-lite	6
LotjaGi6g1v0225700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Growth-regulating factor-like protein; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp\|Q8L8A6\|GRF5_ARATH Growth-regulating factor 5; TrEMBL-Plants: tr\|V7B1C9\|V7B1C9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0225700	Domains IPR014977 IPR014978 IPR031137 PF08879 PF08880 PS51666 PS51667 PTHR31602 PTHR31602:SF46 SM00951 mobidb-lite	11
LotjaGi6g1v0340100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transcription factor jumonji (JmjC) domain protein; TAIR: AT4G21430.1 protein B160; Swiss-Prot: sp\|Q9SSE9\|JMJ25_ARATH Lysine-specific demethylase JMJ25; TrEMBL-Plants: tr\|V7BT86\|V7BT86_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0340100	Domains Coil IPR001841 IPR003347 IPR014977 PF02373 PF08879 PS50089 PS51184 PS51667 PTHR12549 PTHR12549:SF43 SM00558 SSF51197 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	2.94