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IPR014978 is a Glutamine-Leucine-Glutamine, QLQ.
<p>The QLQ domain is characterised by the conserved Gln-Leu-Gln residues. Another feature of this domain is the absolute conservation of bulky aromatic/hydrophobic and acidic amino acid residues such as Phe, Trp, Tyr, Leu, Glu, or their equivalents in terms of chemical and radial properties. The Pro residue is also absolutely conserved. These amino acid residues are critical for the function of the QLQ domain, probably for protein-protein interaction [[cite:PUB00035453]].</p> <p>Some proteins known to conatin a QLQ domain are listed below:</p> <ul> <li>Plant GROWTH-REGULATING FACTOR (GRF) proteins, putative transcription factors.</li> <li>Eukaryotic SWI2/SNF2, transcriptional coactivators.</li></ul>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Growth-regulating factor 5 isoform 3 [Theobroma cacao] gi|508783032|gb|EOY30288.1| | 11 | ||
| – | PREDICTED: chromatin structure-remodeling complex protein SYD-like isoform X2 [Cicer arietinum] gi|502151178|ref|XP_004508316.1| | 8 | ||
| – | Growth-regulating factor [Medicago truncatula] gi|357464113|ref|XP_003602338.1| | 11 | ||
| – | PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| | 9 | ||
| – | PREDICTED: growth-regulating factor 3-like [Cicer arietinum] gi|502111733|ref|XP_004494150.1| | 11 | ||
| – | PREDICTED: growth-regulating factor 5-like isoform X1 [Cicer arietinum] gi|502162164|ref|XP_004512413.1| | 13 | ||
| – | PREDICTED: ATP-dependent helicase BRM-like [Cicer arietinum] gi|502157142|ref|XP_004510773.1| | 12 | ||
| – | PREDICTED: growth-regulating factor 5-like isoform X2 [Cicer arietinum] gi|502156422|ref|XP_004510466.1| | 11 | ||
| – | PREDICTED: growth-regulating factor 9-like isoform X1 [Cicer arietinum] gi|502157860|ref|XP_004510935.1| | 9 | ||
| – | PREDICTED: growth-regulating factor 4-like isoform X2 [Cicer arietinum] gi|502146660|ref|XP_004506550.1| | 11 | ||
| – | Growth-regulating factor 5 isoform 3 [Theobroma cacao] gi|508783032|gb|EOY30288.1| | 11 | ||
| – | PREDICTED: chromatin structure-remodeling complex protein SYD-like isoform X2 [Cicer arietinum] gi|502151178|ref|XP_004508316.1| | 8 | ||
| – | PREDICTED: growth-regulating factor 6-like [Cicer arietinum] gi|502125511|ref|XP_004498953.1| | 11 | ||
| – | Growth-regulating factor [Medicago truncatula] gi|357514785|ref|XP_003627681.1| | 3 | ||
| – | Growth-regulating factor; TAIR: AT4G37740.1 growth-regulating factor 2; Swiss-Prot: sp|Q8L8A8|GRF2_ARATH Growth-regulating factor 2; TrEMBL-Plants: tr|A0A0L9UDP8|A0A0L9UDP8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0294700 | 11 | ||
| – | ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 | 31 | ||
| – | ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 | 30 | ||
| – | Growth-regulating factor; TAIR: AT3G52910.1 growth-regulating factor 4; Swiss-Prot: sp|Q8L8A7|GRF4_ARATH Growth-regulating factor 4; TrEMBL-Plants: tr|V7CXL5|V7CXL5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0679000 | 11 | ||
| – | Growth-regulating factor; TAIR: AT4G37740.1 growth-regulating factor 2; Swiss-Prot: sp|Q6AWY6|GRF3_ORYSJ Growth-regulating factor 3; TrEMBL-Plants: tr|K7K3Y3|K7K3Y3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0342300 | 13 | ||
| – | ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 | 31 | ||
| – | ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 | 31 | ||
| – | Growth-regulating factor-like protein; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp|Q8L8A6|GRF5_ARATH Growth-regulating factor 5; TrEMBL-Plants: tr|A0A0S3SZU0|A0A0S3SZU0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0415100 | 11 | ||
| – | Growth-regulating factor; TAIR: AT2G45480.1 growth-regulating factor 9; Swiss-Prot: sp|Q8S9M3|GRF9_ARATH Growth-regulating factor 9; TrEMBL-Plants: tr|A0A0R0KKP4|A0A0R0KKP4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0431300 | 9 | ||
| – | Growth-regulating factor; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp|Q6AWY4|GRF5_ORYSJ Growth-regulating factor 5; TrEMBL-Plants: tr|I1LP40|I1LP40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0543400 | 11 | ||
| – | Growth-regulating factor-like protein; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp|Q6ZIK5|GRF4_ORYSJ Growth-regulating factor 4; TrEMBL-Plants: tr|V7CCG7|V7CCG7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0326100 | 11 | ||
| – | Chromatin remodeling 1; TAIR: AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|F4IHS2|SYD_ARATH Chromatin structure-remodeling complex protein SYD; TrEMBL-Plants: tr|V7CA49|V7CA49_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0346800 | 27 | ||
| – | Growth-regulating factor; TAIR: AT2G22840.1 growth-regulating factor 1; Swiss-Prot: sp|Q6AWY3|GRF6_ORYSJ Growth-regulating factor 6; TrEMBL-Plants: tr|A0A072VEY4|A0A072VEY4_MEDTR Growth-regulating factor; Found in the gene: LotjaGi5g1v0036300 | 11 | ||
| – | Growth-regulating factor-like protein; TAIR: AT3G13960.1 growth-regulating factor 5; Swiss-Prot: sp|Q8L8A6|GRF5_ARATH Growth-regulating factor 5; TrEMBL-Plants: tr|V7B1C9|V7B1C9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0225700 | 11 | ||
| – | Growth-regulating factor; TAIR: AT2G06200.2 growth-regulating factor 6; Swiss-Prot: sp|Q6AWX7|GRF12_ORYSJ Growth-regulating factor 12; TrEMBL-Plants: tr|I1JKK1|I1JKK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0359800_LC | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SM00951 | SMART | 1 | 3.45 |