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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1549630 |
| Transcript ID | Lj2g3v1549630.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetratricopeptide repeat protein 7B-like isoform X1 [Cicer arietinum] gi|502162104|ref|XP_004512392.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 693 | 682 | 4.10E-225 | – | |
| PANTHER | 12 | 693 | 682 | 4.10E-225 | – | |
| Gene3D | 30 | 67 | 38 | 3.70E-11 | ||
| SUPERFAMILY | 49 | 198 | 150 | 5.69E-06 | ||
| SMART | 118 | 151 | 34 | 3.1 | ||
| SUPERFAMILY | 118 | 152 | 35 | 7.11E-10 | ||
| Gene3D | 120 | 200 | 81 | 3.70E-11 | ||
| SUPERFAMILY | 291 | 339 | 49 | 7.11E-10 | ||
| Gene3D | 299 | 350 | 52 | 3.70E-11 | ||
| ProSiteProfiles | 302 | 335 | 34 | 5.399 | ||
| SMART | 302 | 335 | 34 | 15 | ||
| SUPERFAMILY | 371 | 443 | 73 | 7.11E-10 | ||
| Gene3D | 406 | 685 | 280 | 2.30E-31 | ||
| SUPERFAMILY | 407 | 524 | 118 | 1.99E-06 | ||
| SUPERFAMILY | 539 | 680 | 142 | 1.77E-18 | ||
| SMART | 548 | 581 | 34 | 0.079 | ||
| ProSiteProfiles | 548 | 685 | 138 | 21.556 | ||
| ProSiteProfiles | 548 | 581 | 34 | 7.169 | ||
| SMART | 582 | 615 | 34 | 45 | ||
| ProSiteProfiles | 582 | 615 | 34 | 6.874 | ||
| Pfam | 635 | 679 | 45 | 0.0014 | – | |
| SMART | 652 | 685 | 34 | 1.1 | ||
| ProSiteProfiles | 652 | 685 | 34 | 8.585 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1549630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1549630.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.