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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1575430 |
| Transcript ID | Lj2g3v1575430.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | hydroxy-methyl-glutaryl-coenzyme A reductase [Bacopa monnieri] gi|256681158|gb|ACV04940.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 138 | 138 | 48.686 | ||
| Phobius | 1 | 4 | 4 | – | – | |
| PANTHER | 1 | 147 | 147 | 2.30E-119 | ||
| PANTHER | 1 | 147 | 147 | 2.30E-119 | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| SUPERFAMILY | 2 | 127 | 126 | 1.16E-51 | ||
| Gene3D | 2 | 140 | 139 | 3.90E-60 | ||
| PRINTS | 3 | 29 | 27 | 1.70E-26 | ||
| Pfam | 4 | 138 | 135 | 1.50E-52 | ||
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 21 | 5 | – | – | |
| Phobius | 22 | 104 | 83 | – | – | |
| PRINTS | 57 | 78 | 22 | 1.70E-26 | ||
| ProSitePatterns | 69 | 76 | 8 | – | ||
| Phobius | 105 | 130 | 26 | – | – | |
| ProSitePatterns | 123 | 136 | 14 | – | ||
| Phobius | 131 | 147 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydroxymethylglutaryl-CoA reductase (NADPH) activity | Catalysis of the reaction: (R)-mevalonate + CoA + 2 NADP(+) = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 H(+) + 2 NADPH. | ||
| Biological process | Coenzyme A metabolic process | The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v1575430.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1575430.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.