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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1589590 |
| Transcript ID | Lj2g3v1589590.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Auxin efflux carrier family protein isoform 1 [Theobroma cacao] gi|508698726|gb|EOX90622.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 2 | 420 | 419 | 4.80E-184 | – | |
| PANTHER | 2 | 420 | 419 | 4.80E-184 | – | |
| Pfam | 10 | 411 | 402 | 6.20E-70 | ||
| Phobius | 12 | 32 | 21 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 33 | 43 | 11 | – | – | |
| TMHMM | 44 | 62 | 19 | – | – | |
| Phobius | 44 | 62 | 19 | – | – | |
| Phobius | 63 | 73 | 11 | – | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 74 | 95 | 22 | – | – | |
| Phobius | 96 | 106 | 11 | – | – | |
| Phobius | 107 | 128 | 22 | – | – | |
| TMHMM | 107 | 129 | 23 | – | – | |
| Phobius | 129 | 147 | 19 | – | – | |
| Phobius | 148 | 166 | 19 | – | – | |
| TMHMM | 149 | 166 | 18 | – | – | |
| Phobius | 167 | 253 | 87 | – | – | |
| Phobius | 254 | 278 | 25 | – | – | |
| TMHMM | 254 | 276 | 23 | – | – | |
| Phobius | 279 | 297 | 19 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| Phobius | 298 | 315 | 18 | – | – | |
| Phobius | 316 | 326 | 11 | – | – | |
| TMHMM | 326 | 348 | 23 | – | – | |
| Phobius | 327 | 350 | 24 | – | – | |
| Phobius | 351 | 361 | 11 | – | – | |
| Phobius | 362 | 383 | 22 | – | – | |
| Phobius | 384 | 394 | 11 | – | – | |
| Phobius | 395 | 419 | 25 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 420 | 420 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1589590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1589590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.