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IPR004776

Description

IPR004776 is a Membrane transport PIN-like.

<p>This entry represents a family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants [[cite:PUB00151519]]. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [[cite:PUB00033872], [cite:PUB00033873]]. Plants typically possess several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitropic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments. This entry also covers the transmembrane region of GPR1155 from human, a cholesterol-binding protein that acts as a regulator of mTORC1 signaling pathway [[cite:PUB00151524]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Associated Lotus transcripts 75

Transcript Name Description Predicted domains Domain count
Auxin efflux carrier-like protein [Arabidopsis thaliana] gi|334182727|ref|NP_683316.2| 8
Auxin efflux carrier family protein [Theobroma cacao] gi|508709005|gb|EOY00902.1| 8
PREDICTED: probable auxin efflux carrier component 6-like [Glycine max] gi|356551177|ref|XP_003543954.1| 9
PREDICTED: auxin efflux carrier component 3-like [Glycine max] gi|356521538|ref|XP_003529411.1| 9
Auxin efflux carrier family protein [Theobroma cacao] gi|508727072|gb|EOY18969.1| 8
Auxin efflux carrier protein [Medicago truncatula] gi|25986775|gb|AAM55299.1| 11
Auxin efflux carrier protein [Medicago truncatula] gi|25986775|gb|AAM55299.1| 11
PREDICTED: probable auxin efflux carrier component 6-like [Glycine max] gi|356552773|ref|XP_003544737.1| 10
PREDICTED: probable auxin efflux carrier component 6-like [Glycine max] gi|356552773|ref|XP_003544737.1| 7
Auxin efflux carrier component auxin transport protein [Medicago truncatula] gi|357506749|ref|XP_003623663.1| 8
Auxin Efflux Carrier [Medicago truncatula] gi|357507711|ref|XP_003624144.1| 10
UML [Lotus japonicus] gi|430804040|gb|AGA83304.1| 11
PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| 11
PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| 11
Auxin efflux facilitator isoform 2, partial [Theobroma cacao] gi|508774092|gb|EOY21348.1| 8
PIN11 [Medicago truncatula] gi|481044534|gb|AGJ95049.1| 11
Auxin efflux carrier protein [Medicago truncatula] gi|357484287|ref|XP_003612431.1| 8
Auxin efflux carrier family protein isoform 1 [Theobroma cacao] gi|508698726|gb|EOX90622.1| 8
Auxin efflux carrier family protein [Theobroma cacao] gi|508727086|gb|EOY18983.1| 9
Auxin efflux carrier family protein [Theobroma cacao] gi|508727086|gb|EOY18983.1| 12
TPA_exp: auxin efflux carrier protein [Medicago truncatula] gi|58339253|tpg|DAA05219.1| 9
TPA_exp: auxin efflux carrier protein [Medicago truncatula] gi|58339253|tpg|DAA05219.1| 9
PREDICTED: auxin efflux carrier component 3-like [Cicer arietinum] gi|502143228|ref|XP_004505266.1| 11
PIN2a [Glycine max] gi|481044558|gb|AGJ95061.1| 11
PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| 11
PIN4b [Glycine max] gi|481044552|gb|AGJ95058.1| 11
Auxin efflux carrier protein [Medicago truncatula] gi|357484287|ref|XP_003612431.1| 9
Putative transporter [Aegilops tauschii] gi|475377922|gb|EMT00616.1| 8
Auxin efflux carrier family protein [Populus trichocarpa] gi|224117652|ref|XP_002317634.1| 8
Auxin efflux carrier family protein [Theobroma cacao] gi|508709005|gb|EOY00902.1| 8
Auxin efflux carrier component; TAIR: AT1G77110.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9SQH6|PIN6_ARATH Auxin efflux carrier component 6; TrEMBL-Plants: tr|I1MAE5|I1MAE5_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0168600 11
Auxin efflux carrier family protein; TAIR: AT5G01990.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LZN2|PILS6_ARATH Protein PIN-LIKES 6; TrEMBL-Plants: tr|I3T5T5|I3T5T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0460500 9
Auxin efflux carrier family protein; TAIR: AT5G01990.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LZN2|PILS6_ARATH Protein PIN-LIKES 6; TrEMBL-Plants: tr|I3T5T5|I3T5T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0460500 9
Auxin efflux carrier component; TAIR: AT5G16530.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9FFD0|PIN5_ARATH Auxin efflux carrier component 5; TrEMBL-Plants: tr|A0A0L9U3R1|A0A0L9U3R1_PHAAN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0484100 10
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|Q5FV66|Q5FV66_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 11
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|Q5FV66|Q5FV66_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 11
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|Q5FV66|Q5FV66_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 11
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|I1N4A8|I1N4A8_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0498200 8
Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|L0GC85|L0GC85_LOTJA Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0661500 11
Auxin efflux carrier component; TAIR: AT5G57090.2 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|M9WUK9|M9WUK9_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0661500 10
Auxin efflux carrier component; TAIR: AT2G01420.1 Auxin efflux carrier family protein; Swiss-Prot: sp|P0C0X5|PIN1B_ORYSJ Probable auxin efflux carrier component 1b; TrEMBL-Plants: tr|K7KEN1|K7KEN1_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi1g1v0661500 8
Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|B9X291|B9X291_PEA Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 11
Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|B9X291|B9X291_PEA Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 11
Auxin efflux carrier component; TAIR: AT2G01420.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|Q8GV75|Q8GV75_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 10
Auxin efflux carrier component; TAIR: AT2G01420.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|K7L258|K7L258_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0062600 8
Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q5SMQ9|PIN1A_ORYSJ Auxin efflux carrier component 1a; TrEMBL-Plants: tr|M9WLU7|M9WLU7_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0196800 11
Auxin efflux carrier component; TAIR: AT2G01420.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c; TrEMBL-Plants: tr|A0A165XG59|A0A165XG59_DAUCA Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0196800 8
Auxin efflux carrier component; TAIR: AT5G57090.2 Auxin efflux carrier family protein; Swiss-Prot: sp|Q0IQA5|PIN1D_ORYSJ Probable auxin efflux carrier component 1d; TrEMBL-Plants: tr|V7C3I7|V7C3I7_PHAVU Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0196800 10
Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C6B8|PINI_ARATH Auxin efflux carrier component 1; TrEMBL-Plants: tr|C6ZJZ4|C6ZJZ4_SOYBN Auxin efflux carrier protein 1; Found in the gene: LotjaGi2g1v0196800 9
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|M9WUH6|M9WUH6_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0256600 11
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|M9WUH6|M9WUH6_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0256600 11
Auxin efflux carrier component; TAIR: AT5G15100.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LFP6|PIN8_ARATH Auxin efflux carrier component 8; TrEMBL-Plants: tr|M9WUH6|M9WUH6_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi2g1v0256600 11
Auxin efflux carrier family protein; TAIR: AT1G71090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C999|PILS2_ARATH Protein PIN-LIKES 2; TrEMBL-Plants: tr|G7JZC9|G7JZC9_MEDTR Auxin efflux carrier family protein; Found in the gene: LotjaGi2g1v0273000 9
Auxin efflux carrier family protein; TAIR: AT1G71090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C999|PILS2_ARATH Protein PIN-LIKES 2; TrEMBL-Plants: tr|G7JZC9|G7JZC9_MEDTR Auxin efflux carrier family protein; Found in the gene: LotjaGi2g1v0273000 9
Auxin efflux carrier family protein; TAIR: AT1G20925.1 Auxin efflux carrier family protein; Swiss-Prot: sp|F4HWB6|PILS1_ARATH Protein PIN-LIKES 1; TrEMBL-Plants: tr|A0A151SKJ5|A0A151SKJ5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0352100 8
Auxin efflux carrier family protein; TAIR: AT1G76520.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C9K5|PILS3_ARATH Protein PIN-LIKES 3; TrEMBL-Plants: tr|G7K2M6|G7K2M6_MEDTR Auxin efflux carrier family protein; Found in the gene: LotjaGi2g1v0352100 8
Auxin efflux carrier family protein; TAIR: AT5G65980.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9FKY4|PILS7_ARATH Protein PIN-LIKES 7; TrEMBL-Plants: tr|I1J8B4|I1J8B4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0353700 8
Auxin efflux carrier family protein; TAIR: AT5G65980.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9FKY4|PILS7_ARATH Protein PIN-LIKES 7; TrEMBL-Plants: tr|I1J8B4|I1J8B4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0353700 8
Auxin efflux carrier family protein; TAIR: AT1G76520.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C9K5|PILS3_ARATH Protein PIN-LIKES 3; TrEMBL-Plants: tr|A0A072TKW2|A0A072TKW2_MEDTR Auxin efflux carrier family protein; Found in the gene: LotjaGi3g1v0065800 9
Auxin efflux carrier family protein; TAIR: AT1G20925.1 Auxin efflux carrier family protein; Swiss-Prot: sp|F4HWB6|PILS1_ARATH Protein PIN-LIKES 1; TrEMBL-Plants: tr|A0A151RX36|A0A151RX36_CAJCA Putative transporter C5D6.04; Found in the gene: LotjaGi3g1v0065900 8
Auxin efflux carrier family protein; TAIR: AT1G20925.1 Auxin efflux carrier family protein; Swiss-Prot: sp|F4HWB6|PILS1_ARATH Protein PIN-LIKES 1; TrEMBL-Plants: tr|A0A151RX36|A0A151RX36_CAJCA Putative transporter C5D6.04; Found in the gene: LotjaGi3g1v0065900 8
Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|I1ND75|I1ND75_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 11
Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|I1ND75|I1ND75_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 11
Auxin efflux carrier component; TAIR: AT1G70940.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3; TrEMBL-Plants: tr|I1ND75|I1ND75_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 11
Auxin efflux carrier component; TAIR: AT2G01420.2 Auxin efflux carrier family protein; Swiss-Prot: sp|Q8RWZ6|PIN4_ARATH Auxin efflux carrier component 4; TrEMBL-Plants: tr|Q8GV76|Q8GV76_MEDTR Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0078400 8
Auxin efflux carrier family protein; TAIR: AT5G65980.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9FKY4|PILS7_ARATH Protein PIN-LIKES 7; TrEMBL-Plants: tr|K7LEW8|K7LEW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0138300 8
Auxin efflux carrier family protein; TAIR: AT1G76520.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C9K5|PILS3_ARATH Protein PIN-LIKES 3; TrEMBL-Plants: tr|K7MGQ0|K7MGQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0140700 8
Auxin efflux carrier family protein; TAIR: AT1G76520.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C9K5|PILS3_ARATH Protein PIN-LIKES 3; TrEMBL-Plants: tr|A0A067FRQ6|A0A067FRQ6_CITSI Uncharacterized protein; Found in the gene: LotjaGi4g1v0140700 8
Auxin efflux carrier family protein; TAIR: AT1G76520.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C9K5|PILS3_ARATH Protein PIN-LIKES 3; TrEMBL-Plants: tr|G7L7X2|G7L7X2_MEDTR Auxin efflux carrier family protein; Found in the gene: LotjaGi4g1v0140900 9
Auxin efflux carrier component; TAIR: AT5G57090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9LU77|PIN2_ARATH Auxin efflux carrier component 2; TrEMBL-Plants: tr|I1LVK8|I1LVK8_SOYBN Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0307500 12
Auxin efflux carrier component; TAIR: AT1G73590.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C6B8|PINI_ARATH Auxin efflux carrier component 1; TrEMBL-Plants: tr|I3T0I6|I3T0I6_LOTJA Auxin efflux carrier component; Found in the gene: LotjaGi4g1v0464500 11
Auxin efflux carrier family protein, putative; TAIR: AT1G76520.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C9K5|PILS3_ARATH Protein PIN-LIKES 3; TrEMBL-Plants: tr|K7LKA4|K7LKA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0187300 8
Auxin efflux carrier family protein; TAIR: AT1G71090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C999|PILS2_ARATH Protein PIN-LIKES 2; TrEMBL-Plants: tr|I1N7B8|I1N7B8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0330800 9
Auxin efflux carrier family protein; TAIR: AT1G71090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C999|PILS2_ARATH Protein PIN-LIKES 2; TrEMBL-Plants: tr|I1N7B8|I1N7B8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0330800 9
Auxin efflux carrier family protein; TAIR: AT1G71090.1 Auxin efflux carrier family protein; Swiss-Prot: sp|Q9C999|PILS2_ARATH Protein PIN-LIKES 2; TrEMBL-Plants: tr|I1N7B8|I1N7B8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0330800 9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 1.33