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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1644380 |
| Transcript ID | Lj2g3v1644380.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Poly(A) polymerase [Medicago truncatula] gi|357484075|ref|XP_003612324.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 522 | 515 | 1.70E-200 | – | |
| PANTHER | 8 | 522 | 515 | 1.70E-200 | – | |
| SUPERFAMILY | 61 | 213 | 153 | 1.53E-28 | – | |
| Gene3D | 62 | 213 | 152 | 6.00E-35 | – | |
| CDD | 77 | 213 | 137 | 2.11E-30 | ||
| Pfam | 87 | 216 | 130 | 2.10E-24 | ||
| Gene3D | 217 | 397 | 181 | 6.10E-24 | – | |
| SUPERFAMILY | 217 | 391 | 175 | 1.19E-25 | – | |
| Pfam | 245 | 307 | 63 | 2.00E-11 | ||
| MobiDBLite | 699 | 726 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of Lj2g3v1644380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1644380.1, powered by CORGI.
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