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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002646
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.581s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0099779.1
n.a. tRNA nucleotidyltransferase [Lupinus albus] gi|1139585|gb|AAB03077.1| chr0 42338136 42342754 -
2 domain predictions
3 GO terms
Lj1g3v1464080.2
n.a. PREDICTED: CCA-adding enzyme-like [Cicer arietinum] gi|502133372|ref|XP_004501740.1| chr1 17476919 17482570 -
3 domain predictions
3 GO terms
Lj1g3v1464080.3
n.a. PREDICTED: CCA-adding enzyme-like [Cicer arietinum] gi|502133372|ref|XP_004501740.1| chr1 17479450 17482570 -
3 domain predictions
3 GO terms
Lj2g3v1644380.1
n.a. Poly(A) polymerase [Medicago truncatula] gi|357484075|ref|XP_003612324.1| chr2 25544680 25553660 +
3 domain predictions
3 GO terms
Lj4g3v2882100.2
n.a. PREDICTED: poly(A) polymerase-like [Cicer arietinum] gi|502139505|ref|XP_004503795.1| chr4 38529855 38535882 -
3 domain predictions
3 GO terms
Lj5g3v1869810.1
n.a. PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like [Glycine max] gi|356576137|ref|XP_003556190.1| chr5 26683812 26693486 -
3 domain predictions
3 GO terms
LotjaGi1g1v0094900.1
n.a. Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|P21269|CCA1_YEAST CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0094900 LjG1.1_chr1 14370080 14371826 -
2 domain predictions
3 GO terms
LotjaGi1g1v0334300.1
n.a. Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P0ABF3|PCNB_ECO57 Poly(A) polymerase I; TrEMBL-Plants: tr|K7KL92|K7KL92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0334300 LjG1.1_chr1 79288546 79294427 -
3 domain predictions
3 GO terms
LotjaGi2g1v0356000.1
n.a. Multifunctional CCA protein; TAIR: AT2G17580.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|K7K447|K7K447_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356000 LjG1.1_chr2 83206898 83216112 +
3 domain predictions
3 GO terms
LotjaGi4g1v0420500.1
n.a. Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|G7LI47|G7LI47_MEDTR tRNA nucleotidyltransferase/poly(A) polymerase; Found in the gene: LotjaGi4g1v0420500 LjG1.1_chr4 79581578 79588768 +
3 domain predictions
3 GO terms
LotjaGi4g1v0420500.2
n.a. Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|G7LI47|G7LI47_MEDTR tRNA nucleotidyltransferase/poly(A) polymerase; Found in the gene: LotjaGi4g1v0420500 LjG1.1_chr4 79581587 79588781 +
3 domain predictions
3 GO terms
LotjaGi5g1v0281000.1
n.a. Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0281000 LjG1.1_chr5 59648989 59658911 -
3 domain predictions
3 GO terms
LotjaGi6g1v0218500_LC.2
n.a. tRNA nucleotidyltransferase (CCA-adding enzyme); TAIR: AT1G22660.3 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|Q42867|Q42867_LUPAL tRNA nucleotidyltransferase; Found in the gene: LotjaGi6g1v0218500_LC LjG1.1_chr6 52064588 52071649 +
2 domain predictions
3 GO terms
LotjaGi6g1v0218500_LC.4
n.a. tRNA nucleotidyltransferase (CCA-adding enzyme); TAIR: AT1G22660.3 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|Q42867|Q42867_LUPAL tRNA nucleotidyltransferase; Found in the gene: LotjaGi6g1v0218500_LC LjG1.1_chr6 52064630 52069701 +
2 domain predictions
3 GO terms