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PF01743

Source: Pfam

Description

Poly A polymerase head domain

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0006396
Biological process RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
Subterm of
Part of
GO:0016779
Molecular function Nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.
Subterm of

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
Lj0g3v0099779.1
– TRNA nucleotidyltransferase [Lupinus albus] gi|1139585|gb|AAB03077.1|
Domains
11
Lj1g3v1464080.2
– PREDICTED: CCA-adding enzyme-like [Cicer arietinum] gi|502133372|ref|XP_004501740.1|
Domains
9
Lj1g3v1464080.3
– PREDICTED: CCA-adding enzyme-like [Cicer arietinum] gi|502133372|ref|XP_004501740.1|
Domains
11
Lj2g3v1644380.1
– Poly(A) polymerase [Medicago truncatula] gi|357484075|ref|XP_003612324.1|
Domains
12
Lj4g3v2882100.2
– PREDICTED: poly(A) polymerase-like [Cicer arietinum] gi|502139505|ref|XP_004503795.1|
Domains
14
Lj5g3v1869810.1
– PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like [Glycine max] gi|356576137|ref|XP_003556190.1|
Domains
11
LotjaGi1g1v0094900.1
– Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|P21269|CCA1_YEAST CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0094900
Domains
8
LotjaGi1g1v0334300.1
– Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P0ABF3|PCNB_ECO57 Poly(A) polymerase I; TrEMBL-Plants: tr|K7KL92|K7KL92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0334300
Domains
12
LotjaGi2g1v0356000.1
– Multifunctional CCA protein; TAIR: AT2G17580.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|K7K447|K7K447_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356000
Domains
13
LotjaGi4g1v0420500.1
– Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|G7LI47|G7LI47_MEDTR tRNA nucleotidyltransferase/poly(A) polymerase; Found in the gene: LotjaGi4g1v0420500
Domains
15
LotjaGi4g1v0420500.2
– Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|G7LI47|G7LI47_MEDTR tRNA nucleotidyltransferase/poly(A) polymerase; Found in the gene: LotjaGi4g1v0420500
Domains
15
LotjaGi5g1v0281000.1
– Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0281000
Domains
10
LotjaGi6g1v0218500_LC.2
– TRNA nucleotidyltransferase (CCA-adding enzyme); TAIR: AT1G22660.3 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|Q42867|Q42867_LUPAL tRNA nucleotidyltransferase; Found in the gene: LotjaGi6g1v0218500_LC
Domains
11
LotjaGi6g1v0218500_LC.4
– TRNA nucleotidyltransferase (CCA-adding enzyme); TAIR: AT1G22660.3 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|Q42867|Q42867_LUPAL tRNA nucleotidyltransferase; Found in the gene: LotjaGi6g1v0218500_LC
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF81301 SUPERFAMILY 1 7.14