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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1828800 |
| Transcript ID | Lj2g3v1828800.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nuclear autoantigenic sperm protein-like isoform X1 [Cicer arietinum] gi|502161026|ref|XP_004511989.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| PANTHER | 7 | 40 | 34 | 8.90E-132 | – | |
| PANTHER | 7 | 40 | 34 | 8.90E-132 | – | |
| PANTHER | 58 | 462 | 405 | 8.90E-132 | – | |
| PANTHER | 58 | 462 | 405 | 8.90E-132 | – | |
| SUPERFAMILY | 63 | 123 | 61 | 4.67E-05 | ||
| ProSiteProfiles | 68 | 101 | 34 | 7.67 | ||
| SMART | 68 | 101 | 34 | 10 | ||
| ProSiteProfiles | 68 | 101 | 34 | 7.374 | ||
| Gene3D | 70 | 113 | 44 | 1.60E-12 | ||
| MobiDBLite | 131 | 210 | 80 | – | – | |
| SUPERFAMILY | 212 | 309 | 98 | 6.26E-09 | ||
| Gene3D | 226 | 312 | 87 | 1.60E-12 | ||
| SMART | 238 | 271 | 34 | 0.19 | ||
| ProSiteProfiles | 238 | 271 | 34 | 8.024 | ||
| ProSiteProfiles | 238 | 271 | 34 | 8.755 | ||
| Pfam | 239 | 275 | 37 | 2.70E-08 | ||
| SMART | 280 | 313 | 34 | 160 | ||
| Coils | 335 | 362 | 28 | – | – | |
| MobiDBLite | 384 | 421 | 38 | – | – | |
| MobiDBLite | 434 | 462 | 29 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1828800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1828800.1, powered by CORGI.
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