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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1985190 |
| Transcript ID | Lj2g3v1985190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide transporter PTR1 [Medicago truncatula] gi|357482335|ref|XP_003611453.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 40 | 40 | – | – | |
| PANTHER | 4 | 593 | 590 | 0 | – | |
| PANTHER | 4 | 593 | 590 | 0 | ||
| SUPERFAMILY | 32 | 257 | 226 | 7.59E-26 | ||
| TMHMM | 41 | 63 | 23 | – | – | |
| Phobius | 41 | 69 | 29 | – | – | |
| CDD | 45 | 245 | 201 | 1.78E-04 | ||
| Phobius | 70 | 88 | 19 | – | – | |
| TMHMM | 87 | 106 | 20 | – | – | |
| Phobius | 89 | 106 | 18 | – | – | |
| Phobius | 107 | 112 | 6 | – | – | |
| Pfam | 109 | 537 | 429 | 2.70E-90 | ||
| Phobius | 113 | 135 | 23 | – | – | |
| TMHMM | 113 | 135 | 23 | – | – | |
| Phobius | 136 | 154 | 19 | – | – | |
| Phobius | 155 | 172 | 18 | – | – | |
| TMHMM | 155 | 177 | 23 | – | – | |
| Phobius | 173 | 192 | 20 | – | – | |
| Phobius | 193 | 212 | 20 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 213 | 223 | 11 | – | – | |
| Phobius | 224 | 246 | 23 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 247 | 349 | 103 | – | – | |
| SUPERFAMILY | 334 | 586 | 253 | 7.59E-26 | ||
| TMHMM | 350 | 372 | 23 | – | – | |
| Phobius | 350 | 371 | 22 | – | – | |
| Phobius | 372 | 382 | 11 | – | – | |
| Phobius | 383 | 408 | 26 | – | – | |
| TMHMM | 387 | 406 | 20 | – | – | |
| Phobius | 409 | 428 | 20 | – | – | |
| TMHMM | 427 | 449 | 23 | – | – | |
| Phobius | 429 | 449 | 21 | – | – | |
| Phobius | 450 | 471 | 22 | – | – | |
| Phobius | 472 | 491 | 20 | – | – | |
| Phobius | 492 | 511 | 20 | – | – | |
| Phobius | 512 | 536 | 25 | – | – | |
| Phobius | 537 | 555 | 19 | – | – | |
| Phobius | 556 | 578 | 23 | – | – | |
| TMHMM | 556 | 578 | 23 | – | – | |
| Phobius | 579 | 599 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1985190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1985190.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.