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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2002250 |
| Transcript ID | Lj2g3v2002250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nitrate transporter [Medicago truncatula] gi|357481997|ref|XP_003611284.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 73 | 73 | – | – | |
| PANTHER | 6 | 582 | 577 | 0 | – | |
| PANTHER | 6 | 582 | 577 | 0 | ||
| SUPERFAMILY | 22 | 246 | 225 | 1.27E-26 | ||
| CDD | 37 | 236 | 200 | 2.55E-04 | ||
| Gene3D | 47 | 241 | 195 | 1.40E-12 | – | |
| TMHMM | 47 | 69 | 23 | – | – | |
| Phobius | 74 | 93 | 20 | – | – | |
| TMHMM | 74 | 93 | 20 | – | – | |
| Phobius | 94 | 99 | 6 | – | – | |
| Phobius | 100 | 123 | 24 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Pfam | 102 | 534 | 433 | 1.80E-109 | ||
| Phobius | 124 | 142 | 19 | – | – | |
| Phobius | 143 | 162 | 20 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 163 | 190 | 28 | – | – | |
| TMHMM | 188 | 210 | 23 | – | – | |
| Phobius | 191 | 211 | 21 | – | – | |
| Phobius | 212 | 216 | 5 | – | – | |
| TMHMM | 215 | 237 | 23 | – | – | |
| Phobius | 217 | 236 | 20 | – | – | |
| Phobius | 237 | 335 | 99 | – | – | |
| SUPERFAMILY | 324 | 571 | 248 | 1.27E-26 | ||
| Phobius | 336 | 356 | 21 | – | – | |
| Phobius | 357 | 375 | 19 | – | – | |
| TMHMM | 375 | 397 | 23 | – | – | |
| Phobius | 376 | 398 | 23 | – | – | |
| Phobius | 399 | 418 | 20 | – | – | |
| TMHMM | 417 | 439 | 23 | – | – | |
| Phobius | 419 | 439 | 21 | – | – | |
| Gene3D | 422 | 565 | 144 | 3.40E-05 | – | |
| Phobius | 440 | 458 | 19 | – | – | |
| Phobius | 459 | 483 | 25 | – | – | |
| TMHMM | 464 | 486 | 23 | – | – | |
| Phobius | 484 | 503 | 20 | – | – | |
| TMHMM | 501 | 523 | 23 | – | – | |
| Phobius | 504 | 523 | 20 | – | – | |
| Phobius | 524 | 545 | 22 | – | – | |
| Phobius | 546 | 570 | 25 | – | – | |
| TMHMM | 547 | 569 | 23 | – | – | |
| Phobius | 571 | 582 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2002250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2002250.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.