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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2014180 |
| Transcript ID | Lj2g3v2014180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nitrate transporter 1.1-like [Glycine max] gi|356563306|ref|XP_003549905.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 93 | 93 | – | – | |
| PANTHER | 21 | 612 | 592 | 0 | – | |
| PANTHER | 21 | 612 | 592 | 0 | ||
| SUPERFAMILY | 42 | 268 | 227 | 1.57E-27 | ||
| Gene3D | 70 | 263 | 194 | 4.30E-09 | – | |
| TMHMM | 94 | 113 | 20 | – | – | |
| Phobius | 94 | 113 | 20 | – | – | |
| Phobius | 114 | 124 | 11 | – | – | |
| Pfam | 122 | 550 | 429 | 6.70E-114 | ||
| TMHMM | 125 | 147 | 23 | – | – | |
| Phobius | 125 | 147 | 23 | – | – | |
| Phobius | 148 | 166 | 19 | – | – | |
| Phobius | 167 | 188 | 22 | – | – | |
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 189 | 208 | 20 | – | – | |
| Phobius | 209 | 233 | 25 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Phobius | 234 | 238 | 5 | – | – | |
| Phobius | 239 | 258 | 20 | – | – | |
| TMHMM | 242 | 259 | 18 | – | – | |
| Phobius | 259 | 362 | 104 | – | – | |
| SUPERFAMILY | 346 | 595 | 250 | 1.57E-27 | ||
| CDD | 362 | 557 | 196 | 5.93E-04 | ||
| Phobius | 363 | 380 | 18 | – | – | |
| TMHMM | 363 | 385 | 23 | – | – | |
| Gene3D | 367 | 595 | 229 | 2.00E-04 | – | |
| Phobius | 381 | 399 | 19 | – | – | |
| TMHMM | 398 | 420 | 23 | – | – | |
| Phobius | 400 | 420 | 21 | – | – | |
| Phobius | 421 | 440 | 20 | – | – | |
| TMHMM | 441 | 460 | 20 | – | – | |
| Phobius | 441 | 461 | 21 | – | – | |
| Phobius | 462 | 480 | 19 | – | – | |
| TMHMM | 480 | 502 | 23 | – | – | |
| Phobius | 481 | 505 | 25 | – | – | |
| Phobius | 506 | 525 | 20 | – | – | |
| TMHMM | 523 | 545 | 23 | – | – | |
| Phobius | 526 | 547 | 22 | – | – | |
| Phobius | 548 | 566 | 19 | – | – | |
| TMHMM | 565 | 587 | 23 | – | – | |
| Phobius | 567 | 591 | 25 | – | – | |
| Phobius | 592 | 613 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2014180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2014180.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.