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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2017330 |
| Transcript ID | Lj2g3v2017330.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tyrosine-protein kinase Lyn [Medicago truncatula] gi|357481705|ref|XP_003611138.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 14 | 51 | 38 | – | – | |
| PANTHER | 138 | 425 | 288 | 9.10E-204 | – | |
| PANTHER | 138 | 425 | 288 | 9.10E-204 | – | |
| MobiDBLite | 142 | 172 | 31 | – | – | |
| Gene3D | 151 | 245 | 95 | 1.20E-25 | – | |
| SUPERFAMILY | 155 | 425 | 271 | 2.16E-75 | ||
| Pfam | 183 | 425 | 243 | 4.70E-62 | ||
| SMART | 183 | 424 | 242 | 1.10E-43 | ||
| ProSiteProfiles | 183 | 425 | 243 | 42.35 | ||
| CDD | 189 | 425 | 237 | 1.32E-121 | – | |
| ProSitePatterns | 189 | 210 | 22 | – | ||
| Gene3D | 246 | 425 | 180 | 9.60E-52 | – | |
| PRINTS | 257 | 270 | 14 | 8.80E-12 | ||
| PRINTS | 296 | 314 | 19 | 8.80E-12 | ||
| ProSitePatterns | 302 | 314 | 13 | – | ||
| PRINTS | 343 | 353 | 11 | 8.80E-12 | ||
| PRINTS | 362 | 384 | 23 | 8.80E-12 | ||
| PRINTS | 406 | 425 | 20 | 8.80E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v2017330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2017330.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.