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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2088010 |
| Transcript ID | Lj2g3v2088010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein SPA1-RELATED 2-like [Glycine max] gi|356495711|ref|XP_003516717.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 192 | 219 | 28 | 0 | – | |
| PANTHER | 192 | 219 | 28 | 0 | – | |
| SUPERFAMILY | 302 | 357 | 56 | 4.99E-10 | ||
| Gene3D | 302 | 376 | 75 | 3.10E-07 | – | |
| SUPERFAMILY | 445 | 570 | 126 | 4.99E-10 | ||
| PANTHER | 458 | 646 | 189 | 0 | – | |
| PANTHER | 458 | 646 | 189 | 0 | – | |
| Gene3D | 476 | 583 | 108 | 3.10E-07 | – | |
| Coils | 599 | 626 | 28 | – | – | |
| PANTHER | 720 | 1075 | 356 | 0 | – | |
| PANTHER | 720 | 1075 | 356 | 0 | – | |
| SMART | 746 | 790 | 45 | 1.3 | ||
| Gene3D | 756 | 1074 | 319 | 1.20E-55 | ||
| ProSiteProfiles | 758 | 976 | 219 | 25.417 | ||
| SUPERFAMILY | 759 | 1072 | 314 | 3.38E-51 | ||
| SMART | 800 | 840 | 41 | 0.14 | ||
| ProSiteProfiles | 807 | 849 | 43 | 9.506 | ||
| ProSitePatterns | 827 | 841 | 15 | – | ||
| PRINTS | 827 | 841 | 15 | 3.70E-06 | ||
| SMART | 843 | 883 | 41 | 1.50E-06 | ||
| Pfam | 845 | 883 | 39 | 0.016 | ||
| ProSiteProfiles | 850 | 892 | 43 | 10.642 | ||
| PRINTS | 870 | 884 | 15 | 3.70E-06 | ||
| SMART | 886 | 925 | 40 | 0.071 | ||
| SMART | 929 | 967 | 39 | 4.90E-06 | ||
| Pfam | 935 | 967 | 33 | 0.0012 | ||
| ProSiteProfiles | 936 | 976 | 41 | 13.717 | ||
| ProSitePatterns | 954 | 968 | 15 | – | ||
| PRINTS | 954 | 968 | 15 | 3.70E-06 | ||
| SMART | 978 | 1017 | 40 | 31 | ||
| SMART | 1033 | 1073 | 41 | 12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2088010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2088010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.