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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2102980 |
| Transcript ID | Lj2g3v2102980.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g62670, mitochondrial-like isoform X1 [Cicer arietinum] gi|502163082|ref|XP_004512719.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 346 | 346 | 4.00E-192 | – | |
| PANTHER | 1 | 346 | 346 | 4.00E-192 | – | |
| ProSiteProfiles | 1 | 32 | 32 | 10.435 | ||
| TIGRFAM | 1 | 34 | 34 | 9.90E-08 | ||
| Pfam | 2 | 25 | 24 | 4.70E-06 | ||
| Pfam | 32 | 81 | 50 | 3.90E-19 | ||
| ProSiteProfiles | 33 | 67 | 35 | 11.893 | ||
| TIGRFAM | 35 | 69 | 35 | 4.20E-08 | ||
| Gene3D | 48 | 99 | 52 | 2.90E-05 | ||
| ProSiteProfiles | 68 | 102 | 35 | 11.948 | ||
| TIGRFAM | 70 | 104 | 35 | 4.90E-07 | ||
| Pfam | 102 | 151 | 50 | 2.60E-17 | ||
| ProSiteProfiles | 103 | 137 | 35 | 11.542 | ||
| TIGRFAM | 105 | 139 | 35 | 1.50E-07 | ||
| ProSiteProfiles | 138 | 172 | 35 | 12.595 | ||
| TIGRFAM | 141 | 174 | 34 | 2.30E-10 | ||
| Pfam | 172 | 221 | 50 | 2.00E-21 | ||
| ProSiteProfiles | 173 | 207 | 35 | 14.71 | ||
| TIGRFAM | 175 | 209 | 35 | 2.60E-12 | ||
| Gene3D | 206 | 341 | 136 | 2.90E-05 | ||
| ProSiteProfiles | 208 | 242 | 35 | 12.441 | ||
| TIGRFAM | 210 | 244 | 35 | 2.10E-08 | ||
| Pfam | 239 | 268 | 30 | 3.20E-12 | ||
| ProSiteProfiles | 243 | 277 | 35 | 11.816 | ||
| TIGRFAM | 245 | 278 | 34 | 5.50E-06 | ||
| Pfam | 278 | 324 | 47 | 6.20E-16 | ||
| ProSiteProfiles | 278 | 312 | 35 | 13.987 | ||
| TIGRFAM | 281 | 314 | 34 | 9.80E-12 | ||
| ProSiteProfiles | 313 | 346 | 34 | 10.72 | ||
| TIGRFAM | 315 | 345 | 31 | 5.40E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2102980.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2102980.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.