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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2380080 |
| Transcript ID | Lj2g3v2380080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Os05g0475700 [Oryza sativa Japonica Group] gi|115464465|ref|NP_001055832.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| PANTHER | 3 | 520 | 518 | 0 | – | |
| PANTHER | 3 | 520 | 518 | 0 | – | |
| Phobius | 6 | 25 | 20 | – | – | |
| Pfam | 8 | 252 | 245 | 2.40E-75 | ||
| SUPERFAMILY | 14 | 205 | 192 | 1.22E-16 | ||
| Phobius | 26 | 45 | 20 | – | – | |
| Phobius | 46 | 66 | 21 | – | – | |
| Phobius | 67 | 71 | 5 | – | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 72 | 94 | 23 | – | – | |
| Phobius | 95 | 105 | 11 | – | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 106 | 128 | 23 | – | – | |
| Phobius | 129 | 169 | 41 | – | – | |
| TMHMM | 168 | 190 | 23 | – | – | |
| Phobius | 170 | 190 | 21 | – | – | |
| Phobius | 191 | 201 | 11 | – | – | |
| Phobius | 202 | 221 | 20 | – | – | |
| TMHMM | 203 | 222 | 20 | – | – | |
| Phobius | 222 | 236 | 15 | – | – | |
| TMHMM | 237 | 259 | 23 | – | – | |
| Phobius | 237 | 260 | 24 | – | – | |
| Phobius | 261 | 323 | 63 | – | – | |
| MobiDBLite | 281 | 303 | 23 | – | – | |
| Gene3D | 306 | 514 | 209 | 2.00E-10 | – | |
| SUPERFAMILY | 306 | 516 | 211 | 1.22E-16 | ||
| CDD | 314 | 510 | 197 | 5.29E-05 | ||
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 324 | 342 | 19 | – | – | |
| Phobius | 343 | 361 | 19 | – | – | |
| Phobius | 362 | 382 | 21 | – | – | |
| Phobius | 383 | 393 | 11 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 394 | 410 | 17 | – | – | |
| Phobius | 411 | 415 | 5 | – | – | |
| TMHMM | 416 | 438 | 23 | – | – | |
| Phobius | 416 | 442 | 27 | – | – | |
| Phobius | 443 | 453 | 11 | – | – | |
| TMHMM | 453 | 472 | 20 | – | – | |
| Phobius | 454 | 473 | 20 | – | – | |
| Phobius | 474 | 492 | 19 | – | – | |
| TMHMM | 493 | 512 | 20 | – | – | |
| Phobius | 493 | 512 | 20 | – | – | |
| Phobius | 513 | 524 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2380080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2380080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.