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Lj2g3v2661450.1

Overview

Field Value
Gene ID Lj2g3v2661450
Transcript ID Lj2g3v2661450.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 4-like [Cicer arietinum] gi|502096857|ref|XP_004490848.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.60.21.10
9 313 305 6.80E-145
IPR029052
PANTHER
PTHR11668:SF259
10 315 306 1.50E-256 –
PANTHER
PTHR11668
10 315 306 1.50E-256 –
CDD
cd07414
14 304 291 0 –
Pfam
PF16891
15 62 48 3.70E-20
IPR031675
SUPERFAMILY
SSF56300
25 307 283 1.47E-118
IPR029052
SMART
SM00156
36 306 271 4.60E-175
IPR006186
PRINTS
PR00114
64 91 28 6.80E-95
IPR006186
Pfam
PF00149
64 255 192 7.20E-41
IPR004843
PRINTS
PR00114
93 120 28 6.80E-95
IPR006186
PRINTS
PR00114
126 150 25 6.80E-95
IPR006186
ProSitePatterns
PS00125
127 132 6 –
IPR006186
PRINTS
PR00114
160 186 27 6.80E-95
IPR006186
PRINTS
PR00114
189 216 28 6.80E-95
IPR006186
PRINTS
PR00114
246 266 21 6.80E-95
IPR006186
PRINTS
PR00114
268 284 17 6.80E-95
IPR006186

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj2g3v2661450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2661450.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.