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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2878260 |
| Transcript ID | Lj2g3v2878260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: alkaline ceramidase 3-like [Cicer arietinum] gi|502149720|ref|XP_004507639.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 1 | 253 | 253 | 2.80E-189 | – | |
| PANTHER | 1 | 253 | 253 | 2.80E-189 | – | |
| Pfam | 8 | 247 | 240 | 5.90E-53 | ||
| TMHMM | 32 | 54 | 23 | – | – | |
| Phobius | 32 | 54 | 23 | – | – | |
| Phobius | 55 | 60 | 6 | – | – | |
| Phobius | 61 | 82 | 22 | – | – | |
| TMHMM | 61 | 83 | 23 | – | – | |
| Phobius | 83 | 93 | 11 | – | – | |
| Phobius | 94 | 112 | 19 | – | – | |
| Phobius | 113 | 118 | 6 | – | – | |
| Phobius | 119 | 138 | 20 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 139 | 143 | 5 | – | – | |
| Phobius | 144 | 161 | 18 | – | – | |
| Phobius | 162 | 169 | 8 | – | – | |
| TMHMM | 170 | 192 | 23 | – | – | |
| Phobius | 170 | 186 | 17 | – | – | |
| Phobius | 187 | 205 | 19 | – | – | |
| Phobius | 206 | 226 | 21 | – | – | |
| TMHMM | 207 | 226 | 20 | – | – | |
| Phobius | 227 | 255 | 29 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ceramide metabolic process | The chemical reactions and pathways involving ceramides, any N-acylated sphingoid. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide. |
Expression pattern of Lj2g3v2878260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2878260.1, powered by CORGI.
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