Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0006672

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Ceramide metabolic process
Full defintion The chemical reactions and pathways involving ceramides, any N-acylated sphingoid.
Subterm of

Relationships

The relationship of GO:0006672 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0006672, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
ISBN

· ISBN: 0198547684

, · pages

Associated Lotus transcripts 10

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj1g3v1786020.1
– Alkaline phytoceramidase (aPHC) [Arabidopsis thaliana] gi|334187627|ref|NP_001190292.1|
GO terms
3
Lj2g3v2878260.1
– PREDICTED: alkaline ceramidase 3-like [Cicer arietinum] gi|502149720|ref|XP_004507639.1|
GO terms
3
Lj5g3v0404980.1
– Alkaline phytoceramidase (aPHC) [Theobroma cacao] gi|508782650|gb|EOY29906.1|
GO terms
3
Lj6g3v1786710.1
– Alkaline ceramidase [Medicago truncatula] gi|357447851|ref|XP_003594201.1|
GO terms
3
Lj6g3v2274470.1
– Senescence associated gene 18 isoform 1 [Theobroma cacao] gi|508706170|gb|EOX98066.1|
GO terms
3
LotjaGi1g1v0366900.1
– Alkaline phytoceramidase (APHC); TAIR: AT5G11870.2 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp|Q57321|MGLC_TREPA Galactoside transport system permease protein MglC homolog; TrEMBL-Plants: tr|V7AW36|V7AW36_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0366900
GO terms
3
LotjaGi4g1v0009000.1
– Alkaline ceramidase 3; TAIR: AT4G22330.1 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3; TrEMBL-Plants: tr|G7JKI1|G7JKI1_MEDTR Alkaline phytoceramidase; Found in the gene: LotjaGi4g1v0009000
GO terms
3
LotjaGi4g1v0009000.2
– Alkaline ceramidase 3; TAIR: AT4G22330.1 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3; TrEMBL-Plants: tr|G7JKI1|G7JKI1_MEDTR Alkaline phytoceramidase; Found in the gene: LotjaGi4g1v0009000
GO terms
3
LotjaGi6g1v0287500.1
– Alkaline ceramidase 3; TAIR: AT4G22330.1 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3; TrEMBL-Plants: tr|I3S1V4|I3S1V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0287500
GO terms
3
LotjaGi6g1v0287500.2
– Alkaline ceramidase 3; TAIR: AT4G22330.1 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp|Q9D099|ACER3_MOUSE Alkaline ceramidase 3; TrEMBL-Plants: tr|I3S1V4|I3S1V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0287500
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0016811
Molecular function Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1 10.00