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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2899850 |
| Transcript ID | Lj2g3v2899850.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NBS-LRR resistance protein [Medicago truncatula] gi|357490923|ref|XP_003615749.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 119 | 118 | 4.20E-15 | – | |
| PANTHER | 3 | 620 | 618 | 2.50E-202 | – | |
| PANTHER | 3 | 620 | 618 | 2.50E-202 | – | |
| Coils | 31 | 51 | 21 | – | – | |
| PRINTS | 62 | 76 | 15 | 7.10E-05 | – | |
| SUPERFAMILY | 139 | 287 | 149 | 1.58E-28 | ||
| Gene3D | 154 | 201 | 48 | 9.10E-05 | ||
| Pfam | 155 | 201 | 47 | 6.30E-06 | ||
| Pfam | 203 | 290 | 88 | 1.60E-18 | ||
| PRINTS | 252 | 266 | 15 | 7.10E-05 | – | |
| SUPERFAMILY | 344 | 536 | 193 | 1.90E-30 | ||
| Gene3D | 382 | 566 | 185 | 7.20E-14 | ||
| SUPERFAMILY | 568 | 745 | 178 | 1.90E-30 | ||
| Gene3D | 594 | 729 | 136 | 2.40E-07 | ||
| PANTHER | 675 | 729 | 55 | 2.50E-202 | – | |
| PANTHER | 675 | 729 | 55 | 2.50E-202 | – | |
| PRINTS | 675 | 691 | 17 | 7.10E-05 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj2g3v2899850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2899850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.