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Lj2g3v2899850.2

Overview

Field Value
Gene ID Lj2g3v2899850
Transcript ID Lj2g3v2899850.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23155:SF505
7 487 481 3.00E-172 –
PANTHER
PTHR23155
7 487 481 3.00E-172 –
SUPERFAMILY
SSF52540
8 147 140 1.73E-29
IPR027417
Pfam
PF00931
8 174 167 1.90E-39
IPR002182
SUPERFAMILY
SSF52058
211 403 193 8.84E-30
IPR032675
Gene3D
G3DSA:3.80.10.10
256 432 177 7.40E-11
IPR032675
SUPERFAMILY
SSF52058
435 612 178 8.84E-30
IPR032675
Gene3D
G3DSA:3.80.10.10
463 608 146 2.00E-08
IPR032675
PANTHER
PTHR23155
542 596 55 3.00E-172 –
PANTHER
PTHR23155:SF505
542 596 55 3.00E-172 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 38

Expression data

Expression pattern

Expression pattern of Lj2g3v2899850.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2899850.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.