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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2900010 |
| Transcript ID | Lj2g3v2900010.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nitrate transporter 1.3-like [Glycine max] gi|356554474|ref|XP_003545571.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 10 | 245 | 236 | 1.20E-138 | ||
| PANTHER | 10 | 245 | 236 | 1.20E-138 | – | |
| Pfam | 12 | 174 | 163 | 2.00E-34 | ||
| TMHMM | 29 | 51 | 23 | – | – | |
| Phobius | 32 | 51 | 20 | – | – | |
| Phobius | 52 | 71 | 20 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 72 | 93 | 22 | – | – | |
| SUPERFAMILY | 74 | 213 | 140 | 2.88E-10 | ||
| Gene3D | 76 | 208 | 133 | 6.70E-09 | – | |
| Phobius | 94 | 104 | 11 | – | – | |
| Phobius | 105 | 129 | 25 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 130 | 149 | 20 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 150 | 169 | 20 | – | – | |
| Phobius | 170 | 188 | 19 | – | – | |
| Phobius | 189 | 210 | 22 | – | – | |
| TMHMM | 189 | 211 | 23 | – | – | |
| Phobius | 211 | 246 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v2900010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2900010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.