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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3070850 |
| Transcript ID | Lj2g3v3070850.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12-like [Cicer arietinum] gi|502098599|ref|XP_004491273.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 438 | 438 | 0 | – | |
| PANTHER | 1 | 438 | 438 | 0 | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| CDD | 1 | 417 | 417 | 1.96E-147 | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| TIGRFAM | 3 | 388 | 386 | 3.70E-71 | ||
| Phobius | 3 | 13 | 11 | – | – | |
| Pfam | 3 | 151 | 149 | 7.60E-26 | ||
| Phobius | 14 | 21 | 8 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 22 | 30 | 9 | – | – | |
| Phobius | 31 | 51 | 21 | – | – | |
| Phobius | 52 | 62 | 11 | – | – | |
| TMHMM | 61 | 83 | 23 | – | – | |
| Phobius | 63 | 83 | 21 | – | – | |
| Phobius | 84 | 102 | 19 | – | – | |
| Phobius | 103 | 122 | 20 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 123 | 133 | 11 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| Phobius | 134 | 156 | 23 | – | – | |
| Phobius | 157 | 161 | 5 | – | – | |
| Phobius | 162 | 184 | 23 | – | – | |
| TMHMM | 162 | 184 | 23 | – | – | |
| Phobius | 185 | 204 | 20 | – | – | |
| Phobius | 205 | 223 | 19 | – | – | |
| Pfam | 213 | 373 | 161 | 1.40E-24 | ||
| Phobius | 224 | 228 | 5 | – | – | |
| Phobius | 229 | 251 | 23 | – | – | |
| Phobius | 252 | 282 | 31 | – | – | |
| Phobius | 283 | 307 | 25 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| Phobius | 308 | 326 | 19 | – | – | |
| Phobius | 327 | 349 | 23 | – | – | |
| TMHMM | 327 | 349 | 23 | – | – | |
| Phobius | 350 | 355 | 6 | – | – | |
| Phobius | 356 | 378 | 23 | – | – | |
| TMHMM | 356 | 378 | 23 | – | – | |
| Phobius | 379 | 383 | 5 | – | – | |
| TMHMM | 383 | 405 | 23 | – | – | |
| Phobius | 384 | 407 | 24 | – | – | |
| Coils | 408 | 428 | 21 | – | – | |
| Phobius | 408 | 438 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v3070850.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3070850.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.