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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3132450 |
| Transcript ID | Lj2g3v3132450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: homogentisate phytyltransferase 1, chloroplastic-like [Glycine max] gi|356506430|ref|XP_003521986.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | – | – | |
| PANTHER | 1 | 154 | 154 | 2.00E-67 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 154 | 154 | 2.00E-67 | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 20 | 4 | – | – | |
| Phobius | 21 | 29 | 9 | – | – | |
| Pfam | 24 | 146 | 123 | 9.90E-20 | ||
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 30 | 51 | 22 | – | – | |
| Phobius | 52 | 71 | 20 | – | – | |
| TMHMM | 62 | 84 | 23 | – | – | |
| Phobius | 72 | 91 | 20 | – | – | |
| TMHMM | 89 | 111 | 23 | – | – | |
| Phobius | 92 | 96 | 5 | – | – | |
| Phobius | 97 | 114 | 18 | – | – | |
| Phobius | 115 | 125 | 11 | – | – | |
| TMHMM | 126 | 148 | 23 | – | – | |
| Phobius | 126 | 148 | 23 | – | – | |
| Phobius | 149 | 156 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of Lj2g3v3132450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3132450.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.