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Lj2g3v3318780.1

Overview

Field Value
Gene ID Lj2g3v3318780
Transcript ID Lj2g3v3318780.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: heat shock cognate protein 80-like [Vitis vinifera] gi|359495606|ref|XP_003635036.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 699 699 0
PANTHER 1 699 699 0
PIRSF 1 699 699 5.10E-255
Hamap 2 664 663 27.168
Gene3D 4 214 211 1.00E-101
SUPERFAMILY 5 213 209 5.02E-74
PRINTS 5 25 21 1.20E-82
ProSitePatterns 25 34 10
PRINTS 26 48 23 1.20E-82
SMART 27 182 156 7.50E-07
Pfam 27 181 155 6.20E-14
CDD 29 178 150 1.08E-08
PRINTS 75 92 18 1.20E-82
PRINTS 93 110 18 1.20E-82
PRINTS 118 140 23 1.20E-82
PRINTS 170 187 18 1.20E-82
Pfam 184 682 499 1.40E-237
PRINTS 188 206 19 1.20E-82
MobiDBLite 215 248 34
Coils 227 257 31
SUPERFAMILY 263 518 256 3.94E-107
Coils 522 542 21
SUPERFAMILY 541 663 123 7.19E-39
MobiDBLite 675 699 25

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj2g3v3318780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3318780.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.