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Lj2g3v3337750.2

Overview

Field Value
Gene ID Lj2g3v3337750
Transcript ID Lj2g3v3337750.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description Heat-shock protein [Medicago truncatula] gi|357495325|ref|XP_003617951.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 29 29 – –
MobiDBLite
mobidb-lite
28 63 36 – –
PANTHER
PTHR11528
40 749 710 0
IPR001404
PANTHER
PTHR11528:SF41
40 749 710 0 –
PIRSF
PIRSF002583
42 748 707 2.00E-234
IPR001404
Hamap
MF_00505
81 748 668 25.124
IPR001404
SUPERFAMILY
SSF55874
95 309 215 1.06E-60
IPR003594
Gene3D
G3DSA:3.30.565.10
95 305 211 7.40E-80
IPR003594
PRINTS
PR00775
95 115 21 1.30E-64
IPR020575
ProSitePatterns
PS00298
115 124 10 –
IPR019805
PRINTS
PR00775
116 138 23 1.30E-64
IPR020575
Pfam
PF02518
117 277 161 8.40E-13
IPR003594
CDD
cd00075
121 228 108 9.25E-09 –
PRINTS
PR00775
165 182 18 1.30E-64
IPR020575
PRINTS
PR00775
183 200 18 1.30E-64
IPR020575
PRINTS
PR00775
212 234 23 1.30E-64
IPR020575
PRINTS
PR00775
267 284 18 1.30E-64
IPR020575
Pfam
PF00183
282 747 466 5.20E-185
IPR001404
PRINTS
PR00775
285 303 19 1.30E-64
IPR020575
MobiDBLite
mobidb-lite
315 336 22 – –
Gene3D
G3DSA:3.30.565.10
347 362 16 7.40E-80
IPR003594
SUPERFAMILY
SSF54211
354 612 259 9.10E-87
IPR020568
SUPERFAMILY
SSF110942
635 746 112 1.70E-31 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0051082
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj2g3v3337750.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3337750.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.