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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3403240 |
| Transcript ID | Lj2g3v3403240.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: glutamate receptor 3.2-like [Glycine max] gi|356553421|ref|XP_003545055.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | – | – | |
| SignalP | 1 | 31 | 31 | – | – | |
| Phobius | 1 | 34 | 34 | – | – | |
| TMHMM | 15 | 32 | 18 | – | – | |
| PANTHER | 17 | 647 | 631 | 0 | – | |
| PANTHER | 17 | 647 | 631 | 0 | – | |
| Phobius | 19 | 30 | 12 | – | – | |
| Phobius | 31 | 34 | 4 | – | – | |
| Phobius | 35 | 608 | 574 | – | – | |
| Gene3D | 47 | 163 | 117 | 1.30E-22 | – | |
| SUPERFAMILY | 47 | 435 | 389 | 1.38E-78 | ||
| CDD | 49 | 443 | 395 | 3.08E-118 | – | |
| Pfam | 66 | 423 | 358 | 4.70E-78 | ||
| Gene3D | 164 | 312 | 149 | 3.30E-24 | – | |
| TMHMM | 242 | 259 | 18 | – | – | |
| Gene3D | 313 | 410 | 98 | 1.30E-22 | – | |
| Gene3D | 418 | 434 | 17 | 3.20E-27 | – | |
| SUPERFAMILY | 465 | 611 | 147 | 1.19E-21 | – | |
| SUPERFAMILY | 467 | 479 | 13 | 1.38E-78 | ||
| Gene3D | 467 | 604 | 138 | 3.20E-27 | – | |
| SMART | 486 | 651 | 166 | 1.10E-04 | ||
| Pfam | 503 | 589 | 87 | 3.30E-10 | ||
| TMHMM | 605 | 627 | 23 | – | – | |
| Gene3D | 605 | 636 | 32 | 7.30E-07 | – | |
| Phobius | 609 | 627 | 19 | – | – | |
| Phobius | 628 | 652 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ionotropic glutamate receptor activity | Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts. | ||
| Molecular function | Ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj2g3v3403240.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3403240.1, powered by CORGI.
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