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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0040870 |
| Transcript ID | Lj3g3v0040870.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | nodulin-like protein [Citrus trifoliata] gi|24461856|gb|AAN62343.1|AF506028_10 |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 6 | 556 | 551 | 0 | – | |
| PANTHER | 6 | 556 | 551 | 0 | – | |
| SUPERFAMILY | 10 | 198 | 189 | 3.53E-11 | ||
| Phobius | 12 | 31 | 20 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Gene3D | 13 | 199 | 187 | 1.20E-07 | – | |
| Pfam | 13 | 260 | 248 | 6.40E-83 | ||
| Phobius | 32 | 50 | 19 | – | – | |
| Phobius | 51 | 71 | 21 | – | – | |
| Phobius | 72 | 77 | 6 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 78 | 99 | 22 | – | – | |
| Phobius | 100 | 110 | 11 | – | – | |
| TMHMM | 108 | 130 | 23 | – | – | |
| Phobius | 111 | 131 | 21 | – | – | |
| Phobius | 132 | 142 | 11 | – | – | |
| Phobius | 143 | 162 | 20 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 163 | 173 | 11 | – | – | |
| TMHMM | 174 | 193 | 20 | – | – | |
| Phobius | 174 | 193 | 20 | – | – | |
| Phobius | 194 | 204 | 11 | – | – | |
| Phobius | 205 | 224 | 20 | – | – | |
| TMHMM | 208 | 225 | 18 | – | – | |
| Phobius | 225 | 235 | 11 | – | – | |
| SUPERFAMILY | 236 | 267 | 32 | 4.84E-20 | ||
| Phobius | 236 | 258 | 23 | – | – | |
| TMHMM | 238 | 260 | 23 | – | – | |
| Phobius | 259 | 335 | 77 | – | – | |
| SUPERFAMILY | 329 | 543 | 215 | 4.84E-20 | ||
| Gene3D | 332 | 538 | 207 | 2.70E-13 | – | |
| Phobius | 336 | 363 | 28 | – | – | |
| TMHMM | 348 | 370 | 23 | – | – | |
| CDD | 358 | 537 | 180 | 8.06E-05 | ||
| Phobius | 364 | 382 | 19 | – | – | |
| Phobius | 383 | 403 | 21 | – | – | |
| TMHMM | 383 | 400 | 18 | – | – | |
| Phobius | 404 | 414 | 11 | – | – | |
| Phobius | 415 | 434 | 20 | – | – | |
| TMHMM | 415 | 433 | 19 | – | – | |
| Phobius | 435 | 439 | 5 | – | – | |
| Phobius | 440 | 459 | 20 | – | – | |
| TMHMM | 440 | 462 | 23 | – | – | |
| Phobius | 460 | 470 | 11 | – | – | |
| Phobius | 471 | 498 | 28 | – | – | |
| TMHMM | 472 | 494 | 23 | – | – | |
| Phobius | 499 | 517 | 19 | – | – | |
| TMHMM | 515 | 537 | 23 | – | – | |
| Phobius | 518 | 539 | 22 | – | – | |
| Phobius | 540 | 562 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0040870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0040870.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.