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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0043080 |
| Transcript ID | Lj3g3v0043080.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nucleoporin interacting component (Nup93/Nic96-like) family protein isoform 1 [Theobroma cacao] gi|508717303|gb|EOY09200.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 162 | 151 | 1.10E-33 | ||
| Pfam | 12 | 147 | 136 | 1.20E-17 | ||
| Gene3D | 14 | 59 | 46 | 1.60E-04 | ||
| Gene3D | 104 | 126 | 23 | 1.60E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nuclear pore | Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. | ||
| Molecular function | Structural constituent of nuclear pore | The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules. |
Expression pattern of Lj3g3v0043080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0043080.1, powered by CORGI.
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