Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v0302750.1

Overview

Field Value
Gene ID Lj3g3v0302750
Transcript ID Lj3g3v0302750.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526037|ref|XP_003531626.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR20889:SF4
1 277 277 2.30E-182 –
PANTHER
PTHR20889
1 277 277 2.30E-182 –
PIRSF
PIRSF031051
1 242 242 2.30E-86
IPR016965
TIGRFAM
TIGR01489
4 201 198 2.10E-52
IPR006384
Pfam
PF06888
4 238 235 1.40E-86
IPR016965
TIGRFAM
TIGR01488
5 190 186 1.30E-35
IPR006383
Gene3D
G3DSA:3.40.50.1000
5 26 22 4.60E-07
IPR023214
SUPERFAMILY
SSF56784
5 188 184 3.71E-25
IPR023214
Gene3D
G3DSA:3.40.50.1000
71 185 115 4.60E-07
IPR023214

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj3g3v0302750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0302750.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.