Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016965
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.504s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0125959.1
n.a. Pyridoxal phosphate phosphatase PHOSPHO2 [Medicago truncatula] gi|357520709|ref|XP_003630643.1| chr0 56662699 56664477 -
3 domain predictions
1 GO term
Lj0g3v0193989.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526037|ref|XP_003531626.1| chr0 94668686 94670637 -
3 domain predictions
1 GO term
Lj0g3v0319719.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526041|ref|XP_003531628.1| chr0 166904344 166904671 +
2 domain predictions
1 GO term
Lj0g3v0319729.1
n.a. PREDICTED: inorganic pyrophosphatase 1-like [Cicer arietinum] gi|502156200|ref|XP_004510356.1| chr0 166904632 166909228 +
2 domain predictions
1 GO term
Lj0g3v0319739.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526041|ref|XP_003531628.1| chr0 166904632 166904986 +
2 domain predictions
1 GO term
Lj0g3v0319769.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356522610|ref|XP_003529939.1| chr0 166905401 166905931 +
2 domain predictions
1 GO term
Lj0g3v0319779.1
n.a. Pyridoxal phosphate phosphatase-related protein [Theobroma cacao] gi|508779813|gb|EOY27069.1| chr0 166908180 166908369 +
2 domain predictions
1 GO term
Lj0g3v0319789.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526041|ref|XP_003531628.1| chr0 166908318 166909216 +
3 domain predictions
1 GO term
Lj0g3v0319799.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356522610|ref|XP_003529939.1| chr0 166909195 166909609 +
2 domain predictions
1 GO term
Lj3g3v0301740.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526041|ref|XP_003531628.1| chr3 2180759 2182092 -
3 domain predictions
1 GO term
Lj3g3v0302750.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526037|ref|XP_003531626.1| chr3 2186339 2188243 +
3 domain predictions
1 GO term
Lj3g3v2693540.1
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356522610|ref|XP_003529939.1| chr3 33024895 33048163 -
3 domain predictions
1 GO term
Lj3g3v2693540.2
n.a. PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] gi|356526041|ref|XP_003531628.1| chr3 33046452 33048163 -
3 domain predictions
1 GO term
LotjaGi3g1v0024000.1
n.a. Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|A0A0L9TA82|A0A0L9TA82_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0024000 LjG1.1_chr3 2646340 2647777 -
4 domain predictions
1 GO term
LotjaGi3g1v0024100.1
n.a. Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|I3T6F3|I3T6F3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0024100 LjG1.1_chr3 2663145 2665290 +
4 domain predictions
1 GO term
LotjaGi3g1v0426600.1
n.a. Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|I3S8Y2|I3S8Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0426600 LjG1.1_chr3 83674454 83676490 -
4 domain predictions
1 GO term
LotjaGi3g1v0426700.1
n.a. Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|I3S8Y2|I3S8Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0426700 LjG1.1_chr3 83692142 83693870 -
4 domain predictions
1 GO term
LotjaGi3g1v0426800.1
n.a. Inorganic pyrophosphatase 2; TAIR: AT1G73010.1 inorganic pyrophosphatase 1; Swiss-Prot: sp|Q67YC0|PPSP1_ARATH Inorganic pyrophosphatase 1; TrEMBL-Plants: tr|I3S8Y2|I3S8Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0426800 LjG1.1_chr3 83694661 83697758 -
4 domain predictions
1 GO term
LotjaGi4g1v0441200.1
n.a. Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|G7LJK6|G7LJK6_MEDTR 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Found in the gene: LotjaGi4g1v0441200 LjG1.1_chr4 81489973 81493571 -
4 domain predictions
1 GO term