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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0323390 |
| Transcript ID | Lj3g3v0323390.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Aminophospholipid ATPase [Medicago truncatula] gi|357454575|ref|XP_003597568.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 83 | 83 | – | – | |
| PANTHER | 6 | 481 | 476 | 0 | – | |
| PANTHER | 6 | 481 | 476 | 0 | ||
| Pfam | 42 | 109 | 68 | 2.80E-23 | ||
| SUPERFAMILY | 51 | 143 | 93 | 2.35E-26 | – | |
| TIGRFAM | 57 | 941 | 885 | 0 | ||
| Gene3D | 84 | 213 | 130 | 8.90E-31 | ||
| Phobius | 84 | 100 | 17 | – | – | |
| Phobius | 101 | 105 | 5 | – | – | |
| Phobius | 106 | 125 | 20 | – | – | |
| Phobius | 126 | 302 | 177 | – | – | |
| SUPERFAMILY | 141 | 211 | 71 | 9.02E-16 | – | |
| SUPERFAMILY | 246 | 286 | 41 | 9.02E-16 | – | |
| Gene3D | 251 | 288 | 38 | 8.90E-31 | ||
| SUPERFAMILY | 288 | 416 | 129 | 2.35E-26 | – | |
| Phobius | 303 | 325 | 23 | – | – | |
| TMHMM | 303 | 325 | 23 | – | – | |
| Phobius | 326 | 355 | 30 | – | – | |
| Phobius | 356 | 378 | 23 | – | – | |
| TMHMM | 359 | 381 | 23 | – | – | |
| Phobius | 379 | 960 | 582 | – | – | |
| SUPERFAMILY | 410 | 434 | 25 | 2.71E-33 | ||
| Gene3D | 412 | 459 | 48 | 8.60E-48 | ||
| PRINTS | 422 | 436 | 15 | 4.40E-07 | – | |
| ProSitePatterns | 424 | 430 | 7 | – | ||
| SUPERFAMILY | 429 | 459 | 31 | 1.53E-25 | ||
| Coils | 448 | 468 | 21 | – | – | |
| PANTHER | 497 | 940 | 444 | 0 | – | |
| PANTHER | 497 | 940 | 444 | 0 | ||
| SUPERFAMILY | 521 | 684 | 164 | 1.53E-25 | ||
| Gene3D | 532 | 729 | 198 | 8.60E-48 | ||
| Pfam | 544 | 649 | 106 | 8.50E-12 | – | |
| SUPERFAMILY | 673 | 779 | 107 | 2.71E-33 | ||
| Gene3D | 730 | 786 | 57 | 7.10E-51 | ||
| TIGRFAM | 850 | 940 | 91 | 4.30E-26 | ||
| Gene3D | 850 | 935 | 86 | 7.10E-51 | ||
| SUPERFAMILY | 853 | 923 | 71 | 2.71E-33 | ||
| PRINTS | 879 | 898 | 20 | 4.40E-07 | – | |
| Pfam | 907 | 941 | 35 | 8.20E-15 | ||
| SUPERFAMILY | 928 | 943 | 16 | 2.35E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj3g3v0323390.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0323390.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.