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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0428970 |
| Transcript ID | Lj3g3v0428970.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tyrosine aminotransferase [Medicago truncatula] gi|357516533|ref|XP_003628555.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 3 | 414 | 412 | 2.40E-189 | ||
| TIGRFAM | 9 | 411 | 403 | 1.20E-160 | ||
| PANTHER | 22 | 413 | 392 | 3.00E-291 | – | |
| PANTHER | 22 | 413 | 392 | 3.00E-291 | – | |
| SUPERFAMILY | 25 | 410 | 386 | 1.33E-82 | ||
| Pfam | 38 | 403 | 366 | 1.30E-56 | ||
| CDD | 40 | 404 | 365 | 3.77E-87 | – | |
| Gene3D | 61 | 293 | 233 | 8.40E-63 | ||
| Gene3D | 294 | 412 | 119 | 1.50E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Molecular function | Transaminase activity | Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of Lj3g3v0428970.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0428970.1, powered by CORGI.
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