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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005958
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.456s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0064019.1
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X1 [Cicer arietinum] gi|502082746|ref|XP_004487261.1| chr0 21891829 21893866 -
2 domain predictions
3 GO terms
Lj0g3v0064019.2
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X1 [Cicer arietinum] gi|502082746|ref|XP_004487261.1| chr0 21895817 21898199 -
3 domain predictions
3 GO terms
Lj3g3v0428970.1
n.a. Tyrosine aminotransferase [Medicago truncatula] gi|357516533|ref|XP_003628555.1| chr3 4162385 4166277 -
3 domain predictions
3 GO terms
Lj3g3v2810130.1
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X2 [Cicer arietinum] gi|502082749|ref|XP_004487262.1| chr3 34651123 34663609 +
3 domain predictions
3 GO terms
Lj3g3v2810130.2
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X1 [Cicer arietinum] gi|502082746|ref|XP_004487261.1| chr3 34651123 34654360 +
3 domain predictions
3 GO terms
Lj3g3v2810130.4
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X1 [Cicer arietinum] gi|502082746|ref|XP_004487261.1| chr3 34651123 34659154 +
3 domain predictions
3 GO terms
LotjaGi3g1v0044600.1
n.a. Aminotransferase family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|G7LDS3|G7LDS3_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0044600 LjG1.1_chr3 4756257 4768776 -
3 domain predictions
3 GO terms
LotjaGi3g1v0044600.2
n.a. Aminotransferase family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|G7LDS3|G7LDS3_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0044600 LjG1.1_chr3 4756599 4760225 -
3 domain predictions
3 GO terms
LotjaGi3g1v0044600.3
n.a. Aminotransferase family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|I3S6E7|I3S6E7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0044600 LjG1.1_chr3 4756614 4759205 -
2 domain predictions
3 GO terms
LotjaGi3g1v0446400.1
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A151SF02|A0A151SF02_CAJCA Tyrosine aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85963554 85975934 +
2 domain predictions
3 GO terms
LotjaGi3g1v0446400.2
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|I1LUI0|I1LUI0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85963554 85975934 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.3
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A072VBJ4|A0A072VBJ4_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85963554 85983663 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.4
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A072VBJ4|A0A072VBJ4_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85963554 85983663 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.5
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A0B2R6V7|A0A0B2R6V7_GLYSO Tyrosine aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85963564 85972223 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.6
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A072VBJ4|A0A072VBJ4_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85963564 85983655 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.7
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|I1LUI0|I1LUI0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85968794 85973991 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.8
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A072VBJ4|A0A072VBJ4_MEDTR Tyrosine/nicotianamine family aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85979147 85984041 +
3 domain predictions
3 GO terms
LotjaGi3g1v0446400.9
n.a. Aminotransferase-related family protein; TAIR: AT5G53970.1 Tyrosine transaminase family protein; Swiss-Prot: sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2; TrEMBL-Plants: tr|A0A151SF02|A0A151SF02_CAJCA Tyrosine aminotransferase; Found in the gene: LotjaGi3g1v0446400 LjG1.1_chr3 85979964 85983493 +
2 domain predictions
3 GO terms