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Lj3g3v0579140.1

Overview

Field Value
Gene ID Lj3g3v0579140
Transcript ID Lj3g3v0579140.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable serine/threonine-protein kinase cdc7-like [Cicer arietinum] gi|502173474|ref|XP_004515338.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
146 165 20 – –
Gene3D
G3DSA:3.30.200.20
237 392 156 1.40E-18 –
PANTHER
PTHR11909:SF7
246 442 197 6.50E-74 –
PANTHER
PTHR11909
246 442 197 6.50E-74 –
SUPERFAMILY
SSF56112
275 435 161 1.48E-55
IPR011009
SMART
SM00220
291 759 469 2.10E-50
IPR000719
ProSiteProfiles
PS50011
291 759 469 34.76
IPR000719
Pfam
PF00069
293 438 146 6.60E-24
IPR000719
Gene3D
G3DSA:1.10.510.10
393 439 47 4.00E-45 –
ProSitePatterns
PS00108
403 415 13 –
IPR008271
SUPERFAMILY
SSF56112
616 763 148 1.48E-55
IPR011009
Pfam
PF00069
619 759 141 6.40E-19
IPR000719
PANTHER
PTHR11909
621 702 82 6.50E-74 –
PANTHER
PTHR11909:SF7
621 702 82 6.50E-74 –
Gene3D
G3DSA:1.10.510.10
621 770 150 4.00E-45 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj3g3v0579140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0579140.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.