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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0642460 |
| Transcript ID | Lj3g3v0642460.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Major facilitator superfamily protein isoform 1 [Theobroma cacao] gi|508718453|gb|EOY10350.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 561 | 561 | 0 | – | |
| PANTHER | 1 | 561 | 561 | 0 | – | |
| Phobius | 1 | 65 | 65 | – | – | |
| Pfam | 7 | 255 | 249 | 3.50E-80 | ||
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 66 | 88 | 23 | – | – | |
| Phobius | 89 | 99 | 11 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 100 | 126 | 27 | – | – | |
| Phobius | 127 | 137 | 11 | – | – | |
| TMHMM | 136 | 155 | 20 | – | – | |
| Phobius | 138 | 160 | 23 | – | – | |
| Phobius | 161 | 165 | 5 | – | – | |
| Phobius | 166 | 187 | 22 | – | – | |
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 188 | 206 | 19 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 207 | 226 | 20 | – | – | |
| SUPERFAMILY | 208 | 258 | 51 | 1.70E-16 | ||
| Phobius | 227 | 231 | 5 | – | – | |
| Phobius | 232 | 251 | 20 | – | – | |
| TMHMM | 233 | 255 | 23 | – | – | |
| Phobius | 252 | 343 | 92 | – | – | |
| SUPERFAMILY | 325 | 548 | 224 | 1.70E-16 | ||
| CDD | 337 | 496 | 160 | 3.41E-05 | ||
| Gene3D | 339 | 548 | 210 | 1.20E-08 | – | |
| TMHMM | 344 | 366 | 23 | – | – | |
| Phobius | 344 | 362 | 19 | – | – | |
| Phobius | 363 | 381 | 19 | – | – | |
| Phobius | 382 | 402 | 21 | – | – | |
| Phobius | 403 | 413 | 11 | – | – | |
| TMHMM | 411 | 433 | 23 | – | – | |
| Phobius | 414 | 437 | 24 | – | – | |
| Phobius | 438 | 442 | 5 | – | – | |
| TMHMM | 443 | 465 | 23 | – | – | |
| Phobius | 443 | 463 | 21 | – | – | |
| Phobius | 464 | 474 | 11 | – | – | |
| TMHMM | 472 | 494 | 23 | – | – | |
| Phobius | 475 | 494 | 20 | – | – | |
| Phobius | 495 | 524 | 30 | – | – | |
| TMHMM | 524 | 546 | 23 | – | – | |
| Phobius | 525 | 544 | 20 | – | – | |
| Phobius | 545 | 565 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0642460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0642460.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.