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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0681550 |
| Transcript ID | Lj3g3v0681550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max] gi|356542246|ref|XP_003539580.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 38 | 38 | – | – | |
| PANTHER | 1 | 69 | 69 | 0 | – | |
| PANTHER | 1 | 69 | 69 | 0 | – | |
| Gene3D | 7 | 68 | 62 | 2.90E-04 | – | |
| SUPERFAMILY | 7 | 69 | 63 | 4.71E-10 | – | |
| TMHMM | 31 | 53 | 23 | – | – | |
| Phobius | 39 | 64 | 26 | – | – | |
| Phobius | 65 | 148 | 84 | – | – | |
| PANTHER | 124 | 477 | 354 | 0 | – | |
| PANTHER | 124 | 477 | 354 | 0 | – | |
| Gene3D | 142 | 200 | 59 | 2.90E-04 | – | |
| SUPERFAMILY | 142 | 201 | 60 | 4.71E-10 | – | |
| Phobius | 149 | 166 | 18 | – | – | |
| TMHMM | 149 | 168 | 20 | – | – | |
| Phobius | 167 | 177 | 11 | – | – | |
| TMHMM | 175 | 194 | 20 | – | – | |
| Phobius | 178 | 200 | 23 | – | – | |
| Phobius | 201 | 481 | 281 | – | – | |
| Gene3D | 203 | 270 | 68 | 1.70E-12 | – | |
| SUPERFAMILY | 205 | 395 | 191 | 9.30E-38 | ||
| Gene3D | 275 | 398 | 124 | 2.80E-21 | ||
| SMART | 279 | 408 | 130 | 5.00E-06 | ||
| ProSiteProfiles | 279 | 389 | 111 | 13.474 | ||
| CDD | 279 | 387 | 109 | 9.48E-17 | – | |
| Pfam | 299 | 388 | 90 | 4.50E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v0681550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0681550.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.