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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1037650 |
| Transcript ID | Lj3g3v1037650.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mitochondrial inner membrane protease subunit 1-like isoform X2 [Cicer arietinum] gi|502087890|ref|XP_004488671.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 165 | 165 | 2.10E-70 | ||
| PANTHER | 1 | 165 | 165 | 2.10E-70 | – | |
| Gene3D | 36 | 164 | 129 | 3.60E-32 | ||
| PRINTS | 37 | 53 | 17 | 1.00E-13 | ||
| SUPERFAMILY | 37 | 164 | 128 | 1.71E-40 | ||
| CDD | 40 | 151 | 112 | 4.46E-23 | – | |
| Pfam | 43 | 105 | 63 | 6.40E-07 | ||
| PRINTS | 90 | 102 | 13 | 1.00E-13 | ||
| Pfam | 113 | 150 | 38 | 3.00E-05 | ||
| PRINTS | 118 | 137 | 20 | 1.00E-13 | ||
| ProSitePatterns | 123 | 136 | 14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Serine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj3g3v1037650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1037650.1, powered by CORGI.
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