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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1340550 |
| Transcript ID | Lj3g3v1340550.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: SPX and EXS domain-containing protein 1-like [Cicer arietinum] gi|502083148|ref|XP_004487374.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 65 | 65 | – | – | |
| PANTHER | 28 | 463 | 436 | 0 | – | |
| PANTHER | 28 | 463 | 436 | 0 | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 66 | 87 | 22 | – | – | |
| Phobius | 88 | 106 | 19 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Pfam | 106 | 442 | 337 | 2.70E-104 | ||
| Phobius | 107 | 130 | 24 | – | – | |
| Phobius | 131 | 155 | 25 | – | – | |
| TMHMM | 152 | 174 | 23 | – | – | |
| Phobius | 156 | 175 | 20 | – | – | |
| Phobius | 176 | 186 | 11 | – | – | |
| Phobius | 187 | 207 | 21 | – | – | |
| TMHMM | 187 | 206 | 20 | – | – | |
| Phobius | 208 | 218 | 11 | – | – | |
| Phobius | 219 | 241 | 23 | – | – | |
| Phobius | 242 | 260 | 19 | – | – | |
| Phobius | 261 | 288 | 28 | – | – | |
| ProSiteProfiles | 269 | 469 | 201 | 20.721 | ||
| Phobius | 289 | 386 | 98 | – | – | |
| Phobius | 387 | 405 | 19 | – | – | |
| Phobius | 406 | 410 | 5 | – | – | |
| Phobius | 411 | 427 | 17 | – | – | |
| Phobius | 428 | 469 | 42 | – | – | |
| MobiDBLite | 450 | 469 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj3g3v1340550.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1340550.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.