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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004342
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.269s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0248889.1
n.a. PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] gi|356530102|ref|XP_003533623.1| chr0 128989263 128997202 -
2 domain predictions
1 GO term
Lj1g3v2625880.1
n.a. PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] gi|356568338|ref|XP_003552368.1| chr1 30438476 30448218 +
3 domain predictions
1 GO term
Lj1g3v2625880.3
n.a. PREDICTED: SPX and EXS domain-containing protein 1-like [Glycine max] gi|356568338|ref|XP_003552368.1| chr1 30447251 30448218 +
3 domain predictions
1 GO term
Lj1g3v2979320.1
n.a. PREDICTED: phosphate transporter PHO1 homolog 9-like [Glycine max] gi|356568688|ref|XP_003552542.1| chr1 33916243 33922158 -
3 domain predictions
1 GO term
Lj1g3v2979320.2
n.a. PREDICTED: phosphate transporter PHO1 homolog 9-like [Glycine max] gi|356568688|ref|XP_003552542.1| chr1 33916243 33922158 -
3 domain predictions
1 GO term
Lj2g3v1192950.1
n.a. PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] gi|356496020|ref|XP_003516868.1| chr2 18823810 18828991 +
2 domain predictions
1 GO term
Lj2g3v1192950.2
n.a. PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] gi|356496020|ref|XP_003516868.1| chr2 18823810 18831471 +
3 domain predictions
1 GO term
Lj2g3v1277540.1
n.a. PREDICTED: phosphate transporter PHO1 homolog 10-like [Glycine max] gi|356502567|ref|XP_003520090.1| chr2 20346788 20352370 -
2 domain predictions
1 GO term
Lj2g3v1277540.2
n.a. Xenotropic and polytropic retrovirus receptor-like protein [Medicago truncatula] gi|357487187|ref|XP_003613881.1| chr2 20347659 20348846 -
2 domain predictions
1 GO term
Lj3g3v1340550.1
n.a. PREDICTED: SPX and EXS domain-containing protein 1-like [Cicer arietinum] gi|502083148|ref|XP_004487374.1| chr3 17362920 17370852 -
3 domain predictions
1 GO term
Lj3g3v1340550.2
n.a. PREDICTED: SPX and EXS domain-containing protein 1-like [Cicer arietinum] gi|502083148|ref|XP_004487374.1| chr3 17362920 17370852 -
3 domain predictions
1 GO term
Lj4g3v2829980.1
n.a. PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] gi|356500006|ref|XP_003518826.1| chr4 37964436 37977125 -
3 domain predictions
1 GO term
Lj4g3v2829980.2
n.a. PREDICTED: phosphate transporter PHO1 homolog 1-like isoform 1 [Glycine max] gi|356500006|ref|XP_003518826.1| chr4 37968227 37977125 -
3 domain predictions
1 GO term
Lj5g3v1176810.1
n.a. PREDICTED: phosphate transporter PHO1-like [Glycine max] gi|356535386|ref|XP_003536227.1| chr5 18985940 18994255 +
2 domain predictions
1 GO term
Lj5g3v1176810.2
n.a. PREDICTED: phosphate transporter PHO1-like [Glycine max] gi|356535386|ref|XP_003536227.1| chr5 18985940 18995426 +
3 domain predictions
1 GO term
Lj6g3v0003500.1
n.a. Pho1-like protein [Medicago truncatula] gi|357452341|ref|XP_003596447.1| chr6 259442 272135 -
3 domain predictions
1 GO term
LotjaGi1g1v0470100.1
n.a. SPX and EXS domain-containing protein 1; TAIR: AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1; TrEMBL-Plants: tr|V7B265|V7B265_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0470100 LjG1.1_chr1 98056185 98065476 +
3 domain predictions
1 GO term
LotjaGi1g1v0470100.2
n.a. SPX and EXS domain-containing protein 1; TAIR: AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1; TrEMBL-Plants: tr|V7B265|V7B265_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0470100 LjG1.1_chr1 98058041 98064845 +
3 domain predictions
1 GO term
LotjaGi1g1v0470100.3
n.a. SPX and EXS domain-containing protein 1; TAIR: AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1; TrEMBL-Plants: tr|V7B265|V7B265_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0470100 LjG1.1_chr1 98058426 98064845 +
3 domain predictions
1 GO term
LotjaGi1g1v0505800.1
n.a. Phosphate transporter PHO1-like protein; TAIR: AT3G29060.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q9LJW0|PHO19_ARATH Phosphate transporter PHO1 homolog 9; TrEMBL-Plants: tr|A0A151TCA7|A0A151TCA7_CAJCA Putative phosphate transporter 1; Found in the gene: LotjaGi1g1v0505800 LjG1.1_chr1 102393544 102399872 -
3 domain predictions
1 GO term
LotjaGi2g1v0284100.1
n.a. Phosphate transporter PHO1-like protein; TAIR: AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1; TrEMBL-Plants: tr|I1J6T3|I1J6T3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0284100 LjG1.1_chr2 75706485 75726925 +
3 domain predictions
1 GO term
LotjaGi2g1v0284100.3
n.a. Phosphate transporter PHO1-like protein; TAIR: AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1; TrEMBL-Plants: tr|I1J6T3|I1J6T3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0284100 LjG1.1_chr2 75708191 75713323 +
3 domain predictions
1 GO term
LotjaGi2g1v0300900.1
n.a. Phosphate transporter PHO1-like protein; TAIR: AT1G69480.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q6R8G0|PHO1A_ARATH Phosphate transporter PHO1 homolog 10; TrEMBL-Plants: tr|G7JWG7|G7JWG7_MEDTR Phosphate transporter PHO1-like protein; Found in the gene: LotjaGi2g1v0300900 LjG1.1_chr2 77510328 77519743 -
3 domain predictions
1 GO term
LotjaGi2g1v0300900.2
n.a. Phosphate transporter PHO1-like protein; TAIR: AT1G69480.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q6R8G0|PHO1A_ARATH Phosphate transporter PHO1 homolog 10; TrEMBL-Plants: tr|G7JWG7|G7JWG7_MEDTR Phosphate transporter PHO1-like protein; Found in the gene: LotjaGi2g1v0300900 LjG1.1_chr2 77510328 77519884 -
3 domain predictions
1 GO term
LotjaGi3g1v0191600.1
n.a. SPX and EXS domain-containing protein 1; TAIR: AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1; TrEMBL-Plants: tr|I3T4H0|I3T4H0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0191600 LjG1.1_chr3 27730243 27738741 -
3 domain predictions
1 GO term
LotjaGi4g1v0152100.1
n.a. Phosphate transporter PHO1-like protein; TAIR: AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1; TrEMBL-Plants: tr|A0A1J7HP60|A0A1J7HP60_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0152100 LjG1.1_chr4 25065195 25080237 +
3 domain predictions
1 GO term
LotjaGi4g1v0152100.2
n.a. Phosphate transporter PHO1 like 1; TAIR: AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1; TrEMBL-Plants: tr|A0A1J7HP60|A0A1J7HP60_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0152100 LjG1.1_chr4 25065195 25080237 +
3 domain predictions
1 GO term
LotjaGi4g1v0152100.3
n.a. Phosphate transporter PHO1-like protein; TAIR: AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|Q93ZF5|PHO11_ARATH Phosphate transporter PHO1 homolog 1; TrEMBL-Plants: tr|A0A1J7HP60|A0A1J7HP60_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0152100 LjG1.1_chr4 25065255 25077566 +
3 domain predictions
1 GO term
LotjaGi5g1v0188800.1
n.a. Phosphate transporter PHO1; TAIR: AT3G23430.1 phosphate 1; Swiss-Prot: sp|Q8S403|PHO1_ARATH Phosphate transporter PHO1; TrEMBL-Plants: tr|A0A151U5X3|A0A151U5X3_CAJCA Putative phosphate transporter 1; Found in the gene: LotjaGi5g1v0188800 LjG1.1_chr5 47792390 47804863 +
3 domain predictions
1 GO term
LotjaGi5g1v0188800.2
n.a. Phosphate transporter PHO1; TAIR: AT3G23430.1 phosphate 1; Swiss-Prot: sp|Q8S403|PHO1_ARATH Phosphate transporter PHO1; TrEMBL-Plants: tr|A0A151U5X3|A0A151U5X3_CAJCA Putative phosphate transporter 1; Found in the gene: LotjaGi5g1v0188800 LjG1.1_chr5 47792390 47804863 +
3 domain predictions
1 GO term
LotjaGi6g1v0003600.1
n.a. Phosphate transporter PHO1-like protein; TAIR: AT3G23430.1 phosphate 1; Swiss-Prot: sp|Q8S403|PHO1_ARATH Phosphate transporter PHO1; TrEMBL-Plants: tr|A0A072VHJ2|A0A072VHJ2_MEDTR Phosphate transporter PHO1-like protein; Found in the gene: LotjaGi6g1v0003600 LjG1.1_chr6 741585 752000 -
3 domain predictions
1 GO term